Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3488 |
Symbol | |
ID | 5834420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3866867 |
End bp | 3867622 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641369287 |
Product | ABC transporter related |
Protein accession | YP_001640944 |
Protein GI | 163852901 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.841984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGTT CCGTTCCCCG TCTCGCCCTC GCAGCCGTCG CCTATCGCTA CGGCCCGAGC CCGGTGCTCG ACCGCATCGA TCTCGAAGTC GCCGCCGGCG AGCGCATCGG TATCCTCGGC CGCTCCGGCG TCGGGAAATC GACCCTCTTG CAGATCATGG CCGGGCTGGT CGCACCCTCC GCCGGCAGCG TGCGGCTCGA CGGGACGCCC TCGCGCGGGC CGGTGCCGGG CTGCACGGTG ATGTTCCAGC GCCCTGCCCT GCTGCCTTGG GCGAGCGTGC TCGACAACGT GCTGCTGCCC GCCCGCCTCT CGGGGCGTCT CGGCCGCGAC CGTGCGGCCC GCGAGGCGGA GGCGCGCCGC CTCCTCGACG ATCTCGGCCT CCGCGAGCGC GCGGACGCCA AGCCGCACCA GCTCTCCGGC GGTCAGCAGC AGCGGGTGGC GCTCGCCCGG GCGCTGGCGA GCGAGCCCTC GATCCTGCTT CTCGATGAAC CGTTCTCGGC GCTCGACCCC GAGATGCGCG CGAGCCTGCG CGCCGACGTG CTGCGGCTCG CGCGGGCCCG CGACCTGACA CTGATCGTCG TCACGCATGA CCTTGCCGAC GTCGCAGCGC TGGCAGCCCG TGCCGTGGTG CTCGACGGGC GCCCGGCCCG CATCGCCGCG GACTTTTCCT TCGGTGACGA CGCGGAGGCC GAGTTGCGCC GCCGTCTCGG TTCCGTTGCC CGCGACGCAT CCGGCATCAC CGGTCGCGCC GCCTGA
|
Protein sequence | MSRSVPRLAL AAVAYRYGPS PVLDRIDLEV AAGERIGILG RSGVGKSTLL QIMAGLVAPS AGSVRLDGTP SRGPVPGCTV MFQRPALLPW ASVLDNVLLP ARLSGRLGRD RAAREAEARR LLDDLGLRER ADAKPHQLSG GQQQRVALAR ALASEPSILL LDEPFSALDP EMRASLRADV LRLARARDLT LIVVTHDLAD VAALAARAVV LDGRPARIAA DFSFGDDAEA ELRRRLGSVA RDASGITGRA A
|
| |