Gene Mext_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3461 
Symbol 
ID5835122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3841680 
End bp3842372 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content75% 
IMG OID641369259 
Producthypothetical protein 
Protein accessionYP_001640917 
Protein GI163852874 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR03468] hopanoid-associated phosphorylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.722931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.61149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCCG GCGCGGTGAC GGGTGGAGCA ATCCTCGCGG TCGCGGGATT GGCCCGCGAG 
GCCCGCATCG CCGCCGGGCT GGGCGTCGAG ACGATCCAGG CCGGCGGCAA CTCCGAGCGG
TTGCGAGCTG CGCTCGACCG GCGGTCTCCC GATGACCTGG GCGCGGTCGT CAGCTTCGGA
ATCGCCGGGG GGCTCGACCC CGCCTTGCGG CCGGGCGACA TCGTCATTGG CACGCATATC
GACGCGGACC AGCGGTTCCC CGCCGATCCC GAGCTTGCCC GCCGCCTGTC AGAGCGCCTG
ACCGGCGCGC CGGATCGCGT CGTCGCGGGC GGCCTCGTGG GCTCCGCGGT CGCGGTCATG
ACCGTTGCCG ACAAGGCGGC TTTGCATGCG CGCGCCGGCG CCCTGGCCGT CGATATGGAA
TCGCATGTGG CCGCCGCCTA CGCCGCCCGC CATGCCCTCC CCTTCGCGGC GATCCGGGTG
GTCTGCGACC CCGCAGGACG CGCCCTGCCT GCCTTTGCGG CCTCGGCCCT GACGCCGGAA
GGCGAGCCGG ACATTCGGGC GGTGCTCGGC GCGCTGCTGC GCGGCCGCGC CCGGATCGGC
GAGCTGATTC GGCTCGGCCG CGATTCCTCG GCGGCCTTCG CGGCGCTCGC CCGCTGCCGG
GCCCGGCTCG GACCAGGTCT CGGGCTGCTG TAG
 
Protein sequence
MASGAVTGGA ILAVAGLARE ARIAAGLGVE TIQAGGNSER LRAALDRRSP DDLGAVVSFG 
IAGGLDPALR PGDIVIGTHI DADQRFPADP ELARRLSERL TGAPDRVVAG GLVGSAVAVM
TVADKAALHA RAGALAVDME SHVAAAYAAR HALPFAAIRV VCDPAGRALP AFAASALTPE
GEPDIRAVLG ALLRGRARIG ELIRLGRDSS AAFAALARCR ARLGPGLGLL