| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3212 |
|---|
| Symbol | |
|---|
| ID | 5834923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3564472 |
|---|
| End bp | 3565527 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641369012 |
|---|
| Product | membrane protein AbrB duplication |
|---|
| Protein accession | YP_001640670 |
|---|
| Protein GI | 163852627 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3180] Putative ammonia monooxygenase |
|---|
| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGAGA CCCGCATCCT CCTGCGCTGG GCGGCGCTCG TCGCCGTCTC GGCCGCTCTC
GCCTTTGGCC TGAGCCGCGC GCATTTCCCC GCCGCCTTCC TCCTCGGGCC GATGCTCGCC
GCGATCGCCT TCGGGGTTCG CGGCGCCGGG CTCTCGCTCG GCCGGCCGCT CTTCCTGGCG
GCGCAGGCGG TGATCGGCTG CCTCGTCGCC CGCTCCGCCA CCACCGAGAT CGCCGCGACC
CTGCGCGAGG ACGGCCTCAT CATCCTCGCG GTCGTCGGCG TGACGGTCGC GGCCGGCGCA
CTCACCGGGC TGGCGCTCAC GCGGCTGCGC GTCCTGCCCG GCACGACGGC GGCCTGGGGC
TCCTCGCCGG GCGGGGCCGC GGCCATGGTG GCGATGGCGG AGGATTACGG CGCCGACCCG
CGCTTGGTCG CGTTCATGCA GTACGTGCGC GTCGCCGCCG TGGTGCTCTC GGCCTCGCTC
GCCGCGCGCC TCCTCGCCGA CGTCGCCGGC CCGGCCGGCG CGGGCGCGTC CGGCGAGACG
TGGAGCTGGC CCGGCCTCGC GGCGACGATC GCGGTCGCCG CCGCCGGGTT CGGCCTCGCG
TCGCTGCTGC GGCTGCCCTC CGCTCCCCTG ATCGGGCCGA TGCTGCTCGG CGCGGGCCTG
CACGCCGCCG GCTTCATCGA CATCGCCTTG CCCGCGCCGG TGCTCGAGGC GGCCTATGCG
GCGATCGGCT GGTATGTCGG GCTGCGCTTC AACCGGCGCA CCCTGGACGA GACGCTCCAC
GCGCTGCCGG GCGTGCTGAC GGCGACAATC GGGATCATCC TGCTCTGCGG CGTCTGGGCC
TGGGTCCTGA CGCACTGGCT CCCGATCGAT TTCCTCACCG CCTTCCTGGC CACCAGTCCC
GGCGGGCTCG ATTCGGTGGC GATCATCGCT GTCGGGTCGC GGGCCGACGT GTCCTTCGTG
CTGGCGGTGC AGACCCTGCG CCTGTTCGTC GTGCTGGCGA CCGGCCCGAT CCTCGCCAAG
TGGATCGCCC GGGCGGTCCC GGGAGAGCGA CCGTGA
|
|---|
| Protein sequence | MPETRILLRW AALVAVSAAL AFGLSRAHFP AAFLLGPMLA AIAFGVRGAG LSLGRPLFLA
AQAVIGCLVA RSATTEIAAT LREDGLIILA VVGVTVAAGA LTGLALTRLR VLPGTTAAWG
SSPGGAAAMV AMAEDYGADP RLVAFMQYVR VAAVVLSASL AARLLADVAG PAGAGASGET
WSWPGLAATI AVAAAGFGLA SLLRLPSAPL IGPMLLGAGL HAAGFIDIAL PAPVLEAAYA
AIGWYVGLRF NRRTLDETLH ALPGVLTATI GIILLCGVWA WVLTHWLPID FLTAFLATSP
GGLDSVAIIA VGSRADVSFV LAVQTLRLFV VLATGPILAK WIARAVPGER P
|
|---|
| |