Gene Mext_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3054 
Symbol 
ID5835533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3396187 
End bp3396819 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content72% 
IMG OID641368854 
Productinvasion associated locus B family protein 
Protein accessionYP_001640514 
Protein GI163852471 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGG TCGGGCCGAC CATCGCCTCC GCTCAGGATG CCGCGCCCGA GGCCGCCCCC 
GCGGAGCCGG CCGCGCGACC CAAACCGCGC CCGCGCAAGC CGGCCCCGAA GAAGGAAGAG
CCGGCGAGCG CCGCGCCCTC CGGCACGGTG CTGGAACCCG CGGCCGCCTC CGGATCGGCC
CAGTGGCCGC CCGGCGCCAC GTCGGTCAGC GAGAGCTACG GCGATTGGAC GATGAACTGC
AACCGCGCCG AGGCGCGTAC CGATTGCGTG ATCATCCAGT CGCAGGGCGA CCGGCGCACG
GGCAAGCGGC TGTTCAGCGT CGAGCTGCGG CCGCCCAAGG ACGGGAAGAG CGAGGGCCTG
ATCCTGATGC CGTTCGGCCT TCAGATCGAG CCCGGCGTCT CGTTCAAGCT CGACGACCGG
CAACTCGGCA AGGGCGCGCC CTTCTCGTTC TGCGTCAGCG ACGGCTGCCT CGTGCCGGTC
AGCCTGCCGA CGCTGGCCAC CGACACGATG AAGACGGCGA CCAGCCTCAC CGTCTCGGCG
ACGAAGCCGG ACGCCAAGGA GCCAACGATC ATCACCGTGC CGCTCGCCGG CTTCGCCGCC
GCCTTCGCCC GGGCGAGCGC CTTCGGAAGC TGA
 
Protein sequence
MALVGPTIAS AQDAAPEAAP AEPAARPKPR PRKPAPKKEE PASAAPSGTV LEPAAASGSA 
QWPPGATSVS ESYGDWTMNC NRAEARTDCV IIQSQGDRRT GKRLFSVELR PPKDGKSEGL
ILMPFGLQIE PGVSFKLDDR QLGKGAPFSF CVSDGCLVPV SLPTLATDTM KTATSLTVSA
TKPDAKEPTI ITVPLAGFAA AFARASAFGS