| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2740 |
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| Symbol | |
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| ID | 5831538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3070132 |
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| End bp | 3071478 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641368540 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001640202 |
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| Protein GI | 163852159 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGA CCCTGGCCCC CCTCGACGTT CTCCCCCCGG CACTGCCGCG TCCCGTCGCC
CATGGCTCGA TCCGCAGCCA CCTCACCGTC GCGATCGGCC TCTCCGCCGC CCTCGTCCTC
GGCGTCGGCG GCTGGGCCAC CTTCACCGAG ATCTCGGCCG CGGTGATCGC GCCGGGCCAG
CTCGTGGTCG AAACCGACGT GAAGAAGGTG CAGCACCCCA CCGGCGGTGT CGTCGGCCAG
CTCCTCGCGC GCGAGGGCCA GCGGGTCGCG GCCGGCGACG TGCTGATCCG CCTCGATGAA
ACCCAGACCC GGGCCAACCT CGACATCGTG CTCAAGGCCA TGGACGAGCT GTCAGCGCGG
GGCGCCCGCG ACGAAGCCGA GCGCGACGGG CTCAAGACCA TCACCTTCCC GCCCGACCTC
GTTGCCCGCA TCAACGACGA TCCGAGCGTC GCCCGGCTGA TCGACGGCGA ATCGCGCCTG
TTCGCCTCTC GCGTTGCCGG CCGCGAGGGT CAGAGGGCGC AGTTGCGCGA GCGCGTCGAG
CAACTCCGCC AGGAGATTGC CGGGCTCACC AAGCAGGCCG CGGCCAAGGA CCGTGAGATC
AACCTGATCG GCCACGAACT CGGCGGCGTG CGCGACCTCT ATGCCAAGAA CCTCGTGCCG
CTCTCGCGCG TCACCGCCCT CGAGCGCGAC GCCGCTCGGC TCGAAGGCGA GCGCGGCCAG
CTCGTCGCCT CGACGGCCTC GGCCCGTGGC AAGATCGCCG AGACCGAGCT GCAGATCATC
CAGATCGACA GCGAGATGCG CACCGAGGTC GGAAAGGACC TCGCCGAGAT CCGCGGCAAG
TGGTCGGAAT TGCGCGAGAA GCGTGTGGCG GCGGAAGACC AGCTCAAGCG GGTCGAGCTG
CGCGCGCCGC AGGACGGCTT CGTCCACCAG ATGAGCGTGC ACACGGTGGG CGGGCTCGTG
ACCCCGAGCG AGCCGGCGAT GCTGATCGTG CCGGCCTCCG ACCAGCTCCT CGTCGAAGTG
CGGGTGCAGC CGCAGGACAT CGACAACGTG CGGGTGGGAC AGAAGGCGGT GTTGCGCTTT
GCCGCCTTCA ACACGCGCAC GACGCCGGAG ATCGACGGCG AGGTGGTCCG CGTCTCGGCC
GACGTGACCC AGGACGTGAA GACCGGGCAG AGCTACTACA CGGCGCGAAT CCGCATCCGT
GAGGATCAGA AAGAGCGTCT GAAGGGCCTG CGCCTCGTGC CGGGCATGCC GGTCGAGTCC
TTCACCCAGA TCGGCGAGCG CTCCGTCCTG TCCTATCTCA CCAAGCCGCT CACCGATCAG
ATTGCAAAAG CGTGGCGGGA GCGCTGA
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| Protein sequence | MSTTLAPLDV LPPALPRPVA HGSIRSHLTV AIGLSAALVL GVGGWATFTE ISAAVIAPGQ
LVVETDVKKV QHPTGGVVGQ LLAREGQRVA AGDVLIRLDE TQTRANLDIV LKAMDELSAR
GARDEAERDG LKTITFPPDL VARINDDPSV ARLIDGESRL FASRVAGREG QRAQLRERVE
QLRQEIAGLT KQAAAKDREI NLIGHELGGV RDLYAKNLVP LSRVTALERD AARLEGERGQ
LVASTASARG KIAETELQII QIDSEMRTEV GKDLAEIRGK WSELREKRVA AEDQLKRVEL
RAPQDGFVHQ MSVHTVGGLV TPSEPAMLIV PASDQLLVEV RVQPQDIDNV RVGQKAVLRF
AAFNTRTTPE IDGEVVRVSA DVTQDVKTGQ SYYTARIRIR EDQKERLKGL RLVPGMPVES
FTQIGERSVL SYLTKPLTDQ IAKAWRER
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