| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2631 |
|---|
| Symbol | |
|---|
| ID | 5831412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2944903 |
|---|
| End bp | 2947215 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641368432 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001640094 |
|---|
| Protein GI | 163852051 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCA GTGGATCGGC CTCGGTCGCG GTGACGTGCC ACCGTCGCTG CCGAGGCATC
GTTTCCATCA TGTTCCCCTT TCACCGCCGC TTCTGCGGCC GGTCCCTCCT GTCCGCCGTC
GCCGCCCTCC CCCTTACGGC GTCCGGTCCG GTTCGGGCCC AAGCACTCCT GACACAACTC
GATGAGATCG CGGTGCAAGG CAGCGCCGGG ATCGGCCTGC CCGCCAACGC GCCGGCCGAT
GCCATCGGTG CGGACGCCGC CGCAGCCTTT CGGACGCCGG GTCTGACGCA GTCCTCGCCG
GTCGGCCTCA ACCTGCGCAC GCCGTCGCGC TCGGCGAGCC GGCTCGGACT CACGCCGCTG
GAAACGCCCG CGAGTCTCGA CATCATTTCG GGCGAGACCA TCCGCCTGCG CGGTCAGACC
AGTGTGCTGG AAGCCGTGTC GCAGAACGGC ACCGGCATCA CGGCCTTCGG CTCGCCGGGC
AACGGACTTG GCTTCTTCAC CGCTCGCGGC TTTGCCGGGC AGAACTCGAT CCAGACTTTG
TTCGACGGCA CCCGGCTCTA TGTCGGCGCC AACACCGTCA CCTTCCCGTT CGATACGTGG
AACGTGGAGC GAATCGAAGT GCTGCGCGGG CCGGCCTCCG TTCTCTACGG GGACGGAGCC
ATCGGCGGTA TCGTCAACGT CGTCTCGAAG AAGCCGCTGT TCACGCCGCT CAATGTCGCC
CGCTTCGGCC TCGGCGAGGA CGGCATCGCC CGCGCGGCGG TCGATTCGAC CGGGCCGATC
GGCGAATCCC TGGCCTATCG TCTCAATGTC AGCGGCAACC GTGCCGACGG CTGGATCACG
CCGGAGGGCG AATTCCGCAA TCTCGCGGTC TCGGGCGCGC TGACGCTCCA AGCGAATCCG
GATCTCGCCT TCACGCTCAG CCACGATTTC GGCTACCAGG AGCCTACCCG CTACTGGGGC
ACGCCGCTGG TGAACGGGCG CGTGCCCGAC GCCATCCGCT TCAACAACTA CAACGTCCGC
GATTCGAAGA TCGCCTGGAC CGATAACTGG ACGCAGTTCC GGACGGAGTG GACCCCTTCG
GCCGACGTGA CGGTGCGCAA CACCGCCTAC CGCCTTCAAA GCCGTCGGAA TTGGCGCGAC
GTCGAGCAGT ACCGCTTCAA TCCGGCAACA GGGCTCGTCG ATCGCTCCGA CTATCTCGAA
ATTGGCCATC GCCAGGAACA GGTCGGGAAT CGGTTCGACG CGACGTTCCG CGGCGCCCTT
TTCGGATTGG CCAACACATT CTCGGCCGGC TTCGACGTGA ACCATGTCAG CTTCCGCCAC
GCCAACAACT TCACCTTCTC CGAGACGCCG ACGAGCGTGC CCCTGAACGG CTACGATCCC
GGCTTCTTCC CGCGGGACGG GCGGGCGAGC CCGGCCTACG CCACGCGTAC GAACCAGGCT
TCGGTCTTCG CCGAGGATCG GCTGTTCCTG GCCGACCGGT TGTCGTTCCT CACCGGGGTA
CGCCTCGACG CGCCGCGTCT TCACCGGGAA GATCTACGCA GCGGCGCGAC CTTCGAGCGC
TCGTTCCGCG CCCTCGGCTA CCGCTTCGCG CTGCTCTACG AGCCGACGCC GGACACATCG
CTCTACGCGC AATACGCCAC CGCAACGGAT CCGGTGAACA GCCTGATCAC CCTCTCGCAA
TCGCTGGCCG GCTTCGAACT CTCGACCGGT CGCCAAGTCG AGGTCGGCGC CAAAGGCCTT
GTCTTCAGCG GCGCGGTCGA GTGGACGCTG GCCGGCTACC GCATCGTCAA GGACAACCTG
ATCTCGGCGG TTCCGGGCCA GCCGACGGTC TCGACTCAGG TCGGCCAGCA ATCCTCCCTC
GGCGCGGAGG CCGCGCTCTC CTGGCTCCCC GCCCCCGGCT GGCGCATCGA TGCCAACCTC
GCTTTGCTTC ACGCCCAGTA CGACGACTTC ACTCAGAATG TCGGCGGAGT TGCCGTCTCC
TATGCCGGCA ATCAGCCGAT CAACGTGCCG GAGCAGGTGG CCAATCTCTG GGTCAACTGG
GCCTTCGCCC GCGACTGGGA GGGGCGCGTC GGCCTCCAGC ATGTCGGCGA AGTCTTTTCC
GACTTCGGCA ACACCGCGCG GCGGCCGGCC TACACCCTGG TCAATCTCGG CCTCGACCAT
CAGGTCACCG CCAGCTCCCG CCTGTCGCTG CGGGTCTTCA ACTTGTTCGA CACGATCTAC
GCGGTCGATG GCAGCGCCGT GAACGGTGTC GGCACGGCCT GGGTTCTCGG GCGCCCGCGC
TCATTGGAGG TCGCTTACAC GATCGCGTGG TGA
|
|---|
| Protein sequence | MAGSGSASVA VTCHRRCRGI VSIMFPFHRR FCGRSLLSAV AALPLTASGP VRAQALLTQL
DEIAVQGSAG IGLPANAPAD AIGADAAAAF RTPGLTQSSP VGLNLRTPSR SASRLGLTPL
ETPASLDIIS GETIRLRGQT SVLEAVSQNG TGITAFGSPG NGLGFFTARG FAGQNSIQTL
FDGTRLYVGA NTVTFPFDTW NVERIEVLRG PASVLYGDGA IGGIVNVVSK KPLFTPLNVA
RFGLGEDGIA RAAVDSTGPI GESLAYRLNV SGNRADGWIT PEGEFRNLAV SGALTLQANP
DLAFTLSHDF GYQEPTRYWG TPLVNGRVPD AIRFNNYNVR DSKIAWTDNW TQFRTEWTPS
ADVTVRNTAY RLQSRRNWRD VEQYRFNPAT GLVDRSDYLE IGHRQEQVGN RFDATFRGAL
FGLANTFSAG FDVNHVSFRH ANNFTFSETP TSVPLNGYDP GFFPRDGRAS PAYATRTNQA
SVFAEDRLFL ADRLSFLTGV RLDAPRLHRE DLRSGATFER SFRALGYRFA LLYEPTPDTS
LYAQYATATD PVNSLITLSQ SLAGFELSTG RQVEVGAKGL VFSGAVEWTL AGYRIVKDNL
ISAVPGQPTV STQVGQQSSL GAEAALSWLP APGWRIDANL ALLHAQYDDF TQNVGGVAVS
YAGNQPINVP EQVANLWVNW AFARDWEGRV GLQHVGEVFS DFGNTARRPA YTLVNLGLDH
QVTASSRLSL RVFNLFDTIY AVDGSAVNGV GTAWVLGRPR SLEVAYTIAW
|
|---|
| |