Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2492 |
Symbol | |
ID | 5831182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2795380 |
End bp | 2796804 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641368294 |
Product | diguanylate cyclase |
Protein accession | YP_001639958 |
Protein GI | 163851915 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.379327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGGTG TGCTCGCGCC GATCGGCATG CTGGTGCTCT CGGCCATCAT GCTGCTCGAG CTTCGCCAGG ATGCTTGGGA CAAGGCCGAA CAGACCTCGA AGAACCTGCT TCAGGTGATC GAGCGCGACA TCGCCCGCAA TGTCGAGATC ATCGATCTGT CCCTCCAGGG CGTTGTCGAT AACCTCAAGG TGCCCGGCTT GGCCGGTGCC AGCCCGTCCT TGCGCCGCAT CGCTCTGTTC GATCGCGCCG CGACCGCCCG CGACATGGGG GTCATGCTGG TGATCGACGA GAACGGCGAC AGCATCATCG ATGCAAACGC CGACACGCCC CGCCGGCTCA ACAATGCCGA CCGGGATTAC TTCCAGGCCC ACAAGACGCA GGCCGGTCTC GGCTTGCACA TCAGCCGGCC CTTGATCTCG CGTCTGCTCG GCGAACCGGT GATCGTGCTG AGCCGGCGCA TCGACAAGCC GGACGGCAGC TTCGGCGGCG TGGTGCTGGC GAGCCTGAAA CTGTCCTATT TCAGCAGCCT GTTCGCCCGG ATCGGGCTTG GTCGCGAAGG CGGGATCAAC CTTTACCTGC GCGACGGCAC CCGCGTGATG CGCTACCCCT TCGTGGCGAG CGATATCGGT GCCAACATCA CCGGTGCCCC GACCTTCCAG AACTTCGTCG CCAAGCGCGA AGGCAGCTTC AAGGGCATCT CCGTCCGCGA CGGCGTCGAG CGGTACTACA CCTTCACCCA GGTCGGGGAT TGGCCGCTCG TCCTCAACGT CGCCCTCGGA ACGCGGGAGA TCGAGGCGGA ATGGCGGGAG ACGGCCGCGG TCATCGGCTT GGCGGTCCTC GTCCTGTGCG GATCGACCGT TCTGCTCTCG CTGCTGTTCG GGCGGGAACT GCGCCGCAGC GCGGCCATGC AGGCCGAACT GGCCCGCCTT GCCCAGACCG ACGTTCTGAC CGGCCTGCCG AACCGGCGGC ATTTCGAAAC GGTCTTCGCG CAAGCCTGGG GGACGTCCCG GCGCACGGGC GCACCGCTCG CGCTCATCCT GATCGATGCC GACCACTTCA AGCGCTACAA CGATCGCTAC GGCCACGCGG TCGGCGATGC CGTGCTCAGG GGGCTCGCGG ACAGCTTGAG CGCCAGCGTT CGCCGGCCGG GCGACCTCGT TGCTCGCGTC GGCGGAGAGG AGTTCGCCGT CCTGCTGCCC GGGACGGACC ACGATGGCGC GATGCGCGTC TCCGAGACGA TTCACCAGGC GATCGCCGGA TTCGCCATGC CCTCCGTCGG CATCGGTCCC GGAACAGTCA CCGTGAGCCT CGGCCTCGCC GTAGATTCCG GTGGCGGCAC CGTCGAGGAT CTCTACCGGC GGGCCGACGC GGCGCTCTAC GAGGCCAAGG CGGGCGGGCG GAATCAGACC CGATCTGCGG CCTGA
|
Protein sequence | MLGVLAPIGM LVLSAIMLLE LRQDAWDKAE QTSKNLLQVI ERDIARNVEI IDLSLQGVVD NLKVPGLAGA SPSLRRIALF DRAATARDMG VMLVIDENGD SIIDANADTP RRLNNADRDY FQAHKTQAGL GLHISRPLIS RLLGEPVIVL SRRIDKPDGS FGGVVLASLK LSYFSSLFAR IGLGREGGIN LYLRDGTRVM RYPFVASDIG ANITGAPTFQ NFVAKREGSF KGISVRDGVE RYYTFTQVGD WPLVLNVALG TREIEAEWRE TAAVIGLAVL VLCGSTVLLS LLFGRELRRS AAMQAELARL AQTDVLTGLP NRRHFETVFA QAWGTSRRTG APLALILIDA DHFKRYNDRY GHAVGDAVLR GLADSLSASV RRPGDLVARV GGEEFAVLLP GTDHDGAMRV SETIHQAIAG FAMPSVGIGP GTVTVSLGLA VDSGGGTVED LYRRADAALY EAKAGGRNQT RSAA
|
| |