Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2407 |
Symbol | |
ID | 5834058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2662864 |
End bp | 2663793 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641368206 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001639873 |
Protein GI | 163851830 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGGCC CTCTGTTCGA ACCGCGGGCC TTCCATCCCG GTCAGCAAAG TCCGACCGGC TCGGCGAGCG GTGCCATCAT CGGCGACATC ATGGTGGCAC GGGTGGTGTT CGGGGCGCAG AGTTATCGCC GCGACCGGGA CCTCATCGCC CGCACGCCGG ATCACATCCT CTTCCATCTC TACAACGTTG GCGGCTTCAG CGGCCTCATC AGCGGGCAGC AAACCACGAT CTGGTCGTCG CAGGTCGCGA TCATCGACCT CGCCCAGGAG ATCGATACGC TCGCGGCCTC GTCGGACACG GTCGCGCTCA TCGTCCCGCG GGCCTTGCTG CCAGGCCTGG CCGACAACCC GCTGCCGCCG CGGCTCGATG CCGGACGCAA CCGGCTCCTG GCCGCGCATC TGATCGCGCT GCGTGAACGC AGCACGCTGA TCGAAGAACC GGATGTCGAG GAGGTCGTGA CGCAGACGCT CGATTTCCTG CGCGCGCTGC TCGATCCCTC CCGCGCCGAG GAGACCGCCG CGGCGCCGAC GCTCGCCACC TGTCACCTCA CGCTCGCCGA ACAGACGATC CGCACCCATC TCGCCTCGCC GGACCTGTCG CCGGAGATGA TCGCCAACGA GATCGGCGTG TCGCGCGCGA CCCTCTACCG GATGTTCGCA CCCTATGGCG GCATCATGCG CTCGGTCCAG GAACGGCGGC TCCTGGCCGT CCGGGCCGCC CTCAGCGACC CGCTGGAGAC CCGCCGCCTC TCCCGGCTCG CGACCGATTT CGGGTTCCGC GGCAAGGTCC ATTTCAGCCG CAGCTTCCGC GCCCAGTTCG GCATCACCGC GAGCGAGTTC CGGGCCGAGC AGGTGGCGCT CGCCCAGCGG GATGCGCGGA GCGATCTCGG CGTCCTGCAC GACTGGTGGC CCCGGCTCGG AAACCGATAG
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Protein sequence | MVGPLFEPRA FHPGQQSPTG SASGAIIGDI MVARVVFGAQ SYRRDRDLIA RTPDHILFHL YNVGGFSGLI SGQQTTIWSS QVAIIDLAQE IDTLAASSDT VALIVPRALL PGLADNPLPP RLDAGRNRLL AAHLIALRER STLIEEPDVE EVVTQTLDFL RALLDPSRAE ETAAAPTLAT CHLTLAEQTI RTHLASPDLS PEMIANEIGV SRATLYRMFA PYGGIMRSVQ ERRLLAVRAA LSDPLETRRL SRLATDFGFR GKVHFSRSFR AQFGITASEF RAEQVALAQR DARSDLGVLH DWWPRLGNR
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