Gene Mext_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2407 
Symbol 
ID5834058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2662864 
End bp2663793 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content69% 
IMG OID641368206 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001639873 
Protein GI163851830 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCC CTCTGTTCGA ACCGCGGGCC TTCCATCCCG GTCAGCAAAG TCCGACCGGC 
TCGGCGAGCG GTGCCATCAT CGGCGACATC ATGGTGGCAC GGGTGGTGTT CGGGGCGCAG
AGTTATCGCC GCGACCGGGA CCTCATCGCC CGCACGCCGG ATCACATCCT CTTCCATCTC
TACAACGTTG GCGGCTTCAG CGGCCTCATC AGCGGGCAGC AAACCACGAT CTGGTCGTCG
CAGGTCGCGA TCATCGACCT CGCCCAGGAG ATCGATACGC TCGCGGCCTC GTCGGACACG
GTCGCGCTCA TCGTCCCGCG GGCCTTGCTG CCAGGCCTGG CCGACAACCC GCTGCCGCCG
CGGCTCGATG CCGGACGCAA CCGGCTCCTG GCCGCGCATC TGATCGCGCT GCGTGAACGC
AGCACGCTGA TCGAAGAACC GGATGTCGAG GAGGTCGTGA CGCAGACGCT CGATTTCCTG
CGCGCGCTGC TCGATCCCTC CCGCGCCGAG GAGACCGCCG CGGCGCCGAC GCTCGCCACC
TGTCACCTCA CGCTCGCCGA ACAGACGATC CGCACCCATC TCGCCTCGCC GGACCTGTCG
CCGGAGATGA TCGCCAACGA GATCGGCGTG TCGCGCGCGA CCCTCTACCG GATGTTCGCA
CCCTATGGCG GCATCATGCG CTCGGTCCAG GAACGGCGGC TCCTGGCCGT CCGGGCCGCC
CTCAGCGACC CGCTGGAGAC CCGCCGCCTC TCCCGGCTCG CGACCGATTT CGGGTTCCGC
GGCAAGGTCC ATTTCAGCCG CAGCTTCCGC GCCCAGTTCG GCATCACCGC GAGCGAGTTC
CGGGCCGAGC AGGTGGCGCT CGCCCAGCGG GATGCGCGGA GCGATCTCGG CGTCCTGCAC
GACTGGTGGC CCCGGCTCGG AAACCGATAG
 
Protein sequence
MVGPLFEPRA FHPGQQSPTG SASGAIIGDI MVARVVFGAQ SYRRDRDLIA RTPDHILFHL 
YNVGGFSGLI SGQQTTIWSS QVAIIDLAQE IDTLAASSDT VALIVPRALL PGLADNPLPP
RLDAGRNRLL AAHLIALRER STLIEEPDVE EVVTQTLDFL RALLDPSRAE ETAAAPTLAT
CHLTLAEQTI RTHLASPDLS PEMIANEIGV SRATLYRMFA PYGGIMRSVQ ERRLLAVRAA
LSDPLETRRL SRLATDFGFR GKVHFSRSFR AQFGITASEF RAEQVALAQR DARSDLGVLH
DWWPRLGNR