Gene Mext_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2394 
Symbol 
ID5832126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2646399 
End bp2647289 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content73% 
IMG OID641368193 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001639860 
Protein GI163851817 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.734944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC TGATCCTCGG CGGCGCCGGT CAGGTCGGCA CGGAGCTTCA GGCCTTTCCC 
TGGCCCGAGG GCGTGCGGGT CCACGCGCCC GATCGCCAGA GCCTCGACAT CACCGACGAG
GCGGCTGTTG CGGCTGCCCT CGATGCGCGC GCCTACGCGG CGGTGATCAA CACGGCCGCC
TACACCGCGG TGGATAAGGC CGAGATCGAG GTCGCGGCCG CTTGGCGCCT CAACGCGCTG
GCCCCGGCCA TCCTCGCGGC CGAGACGAAG CGGCGGGCCA TCCCGCTCGT CCATGTCTCG
ACCGACTACG TGTTCGATGG GTCGGGCGAA GGCTTCTACG CCCCCGATGC GCCGGTGAAC
CCGCAGAGCG TCTACGGTGC GAGCAAGGCG GCCGGCGAGA TGGCGGTGCG CTCCGGCAAT
CCGCGCCACG CCATCGTGCG CACCGCCTGG GTGGTGAGCC CGCACCGGGG CAACTTCGTC
AAGACGATGC TGCGGCTCGC GGGCGAGCGG GATCGGCTCA CCGTTGTCGA GGACCAGCAC
GGCTGCCCGA CGTCGGCCGC CGATCTCGCG GGCGCGCTCG CCGCGATCGC CCTGCGGCTG
GCGGGCGACG AGTCCGCGCC CACCGGCACC TTCCACTGCG TCAACGACGG CGCGACGACG
TGGTGCGACT TCGCCCGGGC GATCGTCGCG GGGTCGGCCC GGCGCGGCGG GCGCTCGGTG
CCGATCGAGG GAATCCCGAG TTCCGCCTAC CCGACGCCGG CCCGGCGCCC GGTGAACTCG
CGCCTCTCCA CCCAGAGCCT GACCGACGCC TACGGCCTCG CGCCGCGCTC GTGGGAGCCG
GCGCTCGACG ACATCCTCGA CCGGCTGGTC GGGCCGGTTC GCTCCCACTG A
 
Protein sequence
MDILILGGAG QVGTELQAFP WPEGVRVHAP DRQSLDITDE AAVAAALDAR AYAAVINTAA 
YTAVDKAEIE VAAAWRLNAL APAILAAETK RRAIPLVHVS TDYVFDGSGE GFYAPDAPVN
PQSVYGASKA AGEMAVRSGN PRHAIVRTAW VVSPHRGNFV KTMLRLAGER DRLTVVEDQH
GCPTSAADLA GALAAIALRL AGDESAPTGT FHCVNDGATT WCDFARAIVA GSARRGGRSV
PIEGIPSSAY PTPARRPVNS RLSTQSLTDA YGLAPRSWEP ALDDILDRLV GPVRSH