| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2336 |
|---|
| Symbol | |
|---|
| ID | 5835602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2588000 |
|---|
| End bp | 2589007 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641368135 |
|---|
| Product | WD-40 repeat-containing protein |
|---|
| Protein accession | YP_001639802 |
|---|
| Protein GI | 163851759 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0173512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.936948 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCT CCGCTCCCTC CCTTACCGAC CACGTCGCGG ATATCGCGGC CGGCGCCCAC
GTCACCGCCG CCCACTGGCT CAAGGGGACG CTGGCGCTGG CGCTGGCCGA TGGCGGCGTG
CTGCTGGCCC GCGACGGCGC GATCGAGACC GTCTCCGCCC ACCCGGACAG CGGCATCCTC
GTGGCGGCCA GCGACGGCGC CCGGCTCGTG AGCGGGGGCG ACGATGGCCG CGTGGTCGCG
ACGGCGGCGG ACGGCCGGTC GAGCGAGCTG GCACAGGCCA AGGGCGGTGG CTGGATCGAC
GCGCTGGCGC TCCACGGCGA CGGCTCGTTC GCCTTCGCCT CGGGCCGCGC GATCGTCGCC
CGCGACGCCA AGGGCCGCGA GAAAACTCTC ACGGCGCCCA CCACCGGCCG CGGCCTCGCC
TTCGCGCCGA AGGGCTACCG GCTCGCGGTG GCCCACTACA ACGGCGTCAG CCTCTGGTAC
CCGAACCTCG AGACGCCGCC CGAATTCATC GAGTGGAAGG GCTCGCATCT CGACGTGACG
TGGTCGCCCG ACGGCCGCTT CGTCGTCTCG ACCATGCAGG AGAACGCGCT GCACGGCTGG
CGCCTCCAGC CCGACCGCGG CCACATGCGC ATGTCGGGCT ATCCCGCCAA GGTTCGGTCG
CTCTCGTGGT CGTCGGACGG CAAGTGGCTC GCCACCAGCG GCGCCGAGGC CGCCATCGTC
TGGCCGTTCG ACTCCAAGGA GGGCCCCACC GGCAAGGCGC CCCGGGAATG CGGCGTGCGG
CCGGCACGGG TCTCGCAGGT CGCCTTCCAT CCGAAGGCGC CGGTCCTGGC GATCGGCTAC
GAGGATGGCT GCGTGCTGCT GGTGCGCTTC TCCGATGCCT CGGAGCTGCT GGTGCGCCCG
GCGGTGAAGG GCAGCGCGAT CTCGGCGCTG GCCTGGGACC CGGCCGGCGC CCGCCTCGCC
TTCGGCTGCG CCGACGGGCA GGCCGGCCTG CTCACCCTGC CGGCCTGA
|
|---|
| Protein sequence | MSASAPSLTD HVADIAAGAH VTAAHWLKGT LALALADGGV LLARDGAIET VSAHPDSGIL
VAASDGARLV SGGDDGRVVA TAADGRSSEL AQAKGGGWID ALALHGDGSF AFASGRAIVA
RDAKGREKTL TAPTTGRGLA FAPKGYRLAV AHYNGVSLWY PNLETPPEFI EWKGSHLDVT
WSPDGRFVVS TMQENALHGW RLQPDRGHMR MSGYPAKVRS LSWSSDGKWL ATSGAEAAIV
WPFDSKEGPT GKAPRECGVR PARVSQVAFH PKAPVLAIGY EDGCVLLVRF SDASELLVRP
AVKGSAISAL AWDPAGARLA FGCADGQAGL LTLPA
|
|---|
| |