| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1911 |
|---|
| Symbol | |
|---|
| ID | 5835735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2128071 |
|---|
| End bp | 2129366 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641367711 |
|---|
| Product | arsenical pump membrane protein |
|---|
| Protein accession | YP_001639381 |
|---|
| Protein GI | 163851338 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCGC TCGCCATCTT CCTCGTCACC CTGGTGTTCG TCATCTGGCA GCCCAGGGGC
CTCGGAATCG GGTGGAGCGC GCTCGCCGGC GCTGGCGTCG CGCTGGCCAC GGGCGTGATC
CACCCGGGCG ACATCCCGGT GGTCTGGCAC ATCGTCTGGG ACGCCACCTT CACGTTCGTG
GCGCTCATCA TCATCTCGCT GCTGCTGGAC GAGGCCGGGT TCTTCCATTG GGCCGCCCTG
CACATCGCTC GCTGGGGCGG TGGCCGGGGC CGGCGGCTGT TTCCCCTGGT GATCCTGCTC
GGCGCGGCCA TCGCGGCGGT CTTCGCGAAC GACGGCGCCG CGCTGTTGCT CACCCCCATC
GTGCTGGCGG TCCTGCTGCG GCTCGACTTC AAGCCGGCGG CGGCGCTCGC GTTCATCGTC
GCCTGCGGGT TCGTGGCGGA TTCGACGTCC CTGCCGCTGG TGATCTCGAA CCTCGTCAAC
ATCGTCTCGG CCAACTTCTT CGACGTGACC TTCGGCCGGT ACGCAGCCGT CATGGTGCCC
GTGGACCTCG TGTCCCTGGC GGCGACGTTA TTGGTACTGT GGGCCTACTT CCGGCGTGAC
GTGCCGGCGA CCTATCCCGT GGACGCCCTG GAACGCCCGG CCGAGGCGAT CCGCGACCCG
CTCGTGTTCC GTGCGGCGTT CCCTCTGCTC GGCGTCCTGC TGCTCGCCTA CTTCGTCACC
GCGCCGTTCG GGGTGCCGGT GTCGGTCGTG ACCTGTGCAG GCGCCGCGGT GCTGCTGCTG
CTCGCGAACC GCGGCGGGAC CATCCCGATC CGCAAGGTTC TGACCGGGGC GCCCTGGCAG
ATCGTCCTGT TCAGCCTCGG CATGTACCTC GTGGTCTACG GCCTGCGGAA CGCCGGCCTG
ACCGACGAGC TGGCCAAGGG CTTGGTCTGG CTCGCGGGCC ACGGCCCATG GGTCGCCACG
GTCGGCACCG GCTTCGCGGC GGCCATCCTA TCGTCGGTGA TGAACAACAT GCCGAGCGTG
CTGATCGGCG CGCTCTCGAT CCAGCAGGCC CCGGACCTGT CGCCGCTGAC CCGCGAACTG
ATGGTCTACG CCAACGTCAT CGGCTGCGAC CTCGGGCCGA AGTTCACGCC CATCGGCAGC
CTCGCCACGC TGCTCTGGCT GCACGTCCTC GACAGCAAGG GCCAGAGGAT CACCTGGGGC
CAGTACATGA AGGTCGGCCT CGTCATCACC CCGCCGGTGC TGCTGGTGAC GCTCCTCGCG
CTCGCCGTCT GGCTCCCGGT CCTCGGTCCC CAATGA
|
|---|
| Protein sequence | MLALAIFLVT LVFVIWQPRG LGIGWSALAG AGVALATGVI HPGDIPVVWH IVWDATFTFV
ALIIISLLLD EAGFFHWAAL HIARWGGGRG RRLFPLVILL GAAIAAVFAN DGAALLLTPI
VLAVLLRLDF KPAAALAFIV ACGFVADSTS LPLVISNLVN IVSANFFDVT FGRYAAVMVP
VDLVSLAATL LVLWAYFRRD VPATYPVDAL ERPAEAIRDP LVFRAAFPLL GVLLLAYFVT
APFGVPVSVV TCAGAAVLLL LANRGGTIPI RKVLTGAPWQ IVLFSLGMYL VVYGLRNAGL
TDELAKGLVW LAGHGPWVAT VGTGFAAAIL SSVMNNMPSV LIGALSIQQA PDLSPLTREL
MVYANVIGCD LGPKFTPIGS LATLLWLHVL DSKGQRITWG QYMKVGLVIT PPVLLVTLLA
LAVWLPVLGP Q
|
|---|
| |