| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1905 |
|---|
| Symbol | |
|---|
| ID | 5833962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2121934 |
|---|
| End bp | 2123691 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641367705 |
|---|
| Product | recombinase |
|---|
| Protein accession | YP_001639375 |
|---|
| Protein GI | 163851332 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0302964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGGGC TCCGCACTTT CGGACGCCCG ATGCCCAAGT GCTACTCCTA CATCCGGTTC
TCGCGTCCCG AGCAGATGCG CGGCGACAGC TTGCGGCGCC AGACCGAAGC CGCCGAGAAG
TGGGCCGCCG AGAACGGCAT GGTCATCGAC GAGAGCCTGA CGGACCTCGG CGTCAGCGCC
TATCGCGGCC TCAACAGGCT CAAGGGCGCG CTCGGAAAGT TCCTCGAACT CGTCGCCGGG
GGACAGGTGC CGAAGGGCTC CTACCTGATC ATCGAGAGCC TGGACCGCTT CAGCCGCGAG
GACGCCCTCG ACGTCATCAG CGAGTTCTCC AAGGTCCTGA GGTCGGGCGT CACCATCGTC
ACGCTGCTCG ACGGGCAGGT CTACTCCCGC GAGCGGATCA AGGCCGAGCC CATGGCGCTG
TTCGGCTCGC TCATGGTGAT GATGCGCGCC CACGAGGAGA GTAAGACGAA GGGCAAGCGG
GTCGGGGAGG CCTGGGAGAA GAAGCGGAAG TCGGCCTCGG ACGCGGTGCT GACGGCGCGT
GTCCCCGGCT GGTTGCAGGT CGTCGAGGAC GGCGGCAGGC GACGGATCGA GTTCAAGCCG
CACGGGCGGG AAGTCGTCCG CCGGATCTTC GCGGACACGG TCAACGGGTA CGGCAAGCTG
AAGGTCGCCC AACGCCTCAA GGAGGCCGGC TTCGAGACCT TCGAGGACGG CAAGACCTGG
CATGGGTCCT ACGTCCAGAA GGTGCTGCGT AACCGGGCGA CCTTCGGCGA GATGCAGCCC
TACAAGCGGG ACGAGGAAGG CCGCAGGGTG CCGGCCGGTC CCCCGGTCAA GGGATACTAC
CCCGCAGCCG TCAGCGAGGC GGACTTCATG CGCGCCTCGG CGGCGCTGGC CCTGCGCGAC
AAGTCCGGCG GGCCGCGCGA GGCCACGGGC GAGGCAAACC TCCTGCGCAA CCTCGCCCGC
TGCACCTGCG GCGGCCGGAT GCGGCGCGAG AACAAGGGCG GGAAGAGCTC AGCGTGGCTT
GTCTGCGCCG AGGCGTCCCG GGGCGACTGC ACCAACACGC GTCGTTGGCG CCTCGACCTC
GCCGAGGAGA AGCTCCTCGG CTGCTCGGCC CGCATCGATT TTCGCAAGCT CCTCGCCGCC
GAGGGCGAGA AGATGGACGC GCCTCCGACG GTCGCCGATT ACGAGGCCAA GGCCGCGGAG
GTTTCCAAGC GGCTCGCCGC CATCATGGCC GTCGTCGAGA TGGGTGTGAC CGCGTATGCG
CACCGCGCCG TCGAGCTGCA GAAGGAGTCC GACGAGGCCG AGGCCGAGCT CGCCCGCGTC
CGGCGGCTCG GGGCCATCGG TGCGCACCAG CCGACCCCGG AGCAACGGCG GCGGACCCTG
GCGGAACTCA AGGCCAGGCT CGCGGGTGCG ACCGACGCGG AGCGGGCCGA CCTACGCGTC
CGGCTCGCCC AGGAGGTACG GGCGGCGTTC AAGGAGGTCA CTTTCGGGCC GGACCGGATC
ACGGCGACCT ACAAGGGAAT GGTACCCTTC GGTAAGGTTC TGCAGCCGCG CGACGTGACG
GTCCTGATCC ACACCGAGAA CCCGGACGAG ATCGCCGAAT TCCAGTCGGC CGCCCTGGAG
ATGGACGAGG GCAACCGGCG CAGCGGGTCG GTCGCCGAGT TCGCCCGGCG CCAGCGGGCG
CGCTCGGGTG CCTTGGAGAA CTTGGAACCG AAGGTTGACC TTCTTGACGA GGTGTTTGAC
CCGATGCCCG CCGTATGA
|
|---|
| Protein sequence | MPGLRTFGRP MPKCYSYIRF SRPEQMRGDS LRRQTEAAEK WAAENGMVID ESLTDLGVSA
YRGLNRLKGA LGKFLELVAG GQVPKGSYLI IESLDRFSRE DALDVISEFS KVLRSGVTIV
TLLDGQVYSR ERIKAEPMAL FGSLMVMMRA HEESKTKGKR VGEAWEKKRK SASDAVLTAR
VPGWLQVVED GGRRRIEFKP HGREVVRRIF ADTVNGYGKL KVAQRLKEAG FETFEDGKTW
HGSYVQKVLR NRATFGEMQP YKRDEEGRRV PAGPPVKGYY PAAVSEADFM RASAALALRD
KSGGPREATG EANLLRNLAR CTCGGRMRRE NKGGKSSAWL VCAEASRGDC TNTRRWRLDL
AEEKLLGCSA RIDFRKLLAA EGEKMDAPPT VADYEAKAAE VSKRLAAIMA VVEMGVTAYA
HRAVELQKES DEAEAELARV RRLGAIGAHQ PTPEQRRRTL AELKARLAGA TDAERADLRV
RLAQEVRAAF KEVTFGPDRI TATYKGMVPF GKVLQPRDVT VLIHTENPDE IAEFQSAALE
MDEGNRRSGS VAEFARRQRA RSGALENLEP KVDLLDEVFD PMPAV
|
|---|
| |