Gene Mext_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1880 
Symbol 
ID5831595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2099691 
End bp2100482 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID641367680 
Productregulatory protein Crp 
Protein accessionYP_001639350 
Protein GI163851307 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCCG AGATCGACGC CCTGCTCCGC GGCAACCTGC TCCTCAGTGC TCTGCGTCCG 
TCGGATCAAG CGCTGCTCAA GCCCCATCTG GAGCTGCAGG AGTTTCAGCG CGGCGACCTG
CTGTTCGAGG CCGGCGAGGA CGTCTGCTGC ATCTCTTTCC CGCTCGGCCA GTGCGTAGCT
GCTCTCGTGA TCGGGCTGCA GGACGGTCGC GCGGTCGAGA CCGCCACGGT CGGCCACGAG
GGGGCAATCG GTGGCGTGGT CAGCCAGGGC TCGCTGCCCG CCTTCAGCCG GGCCGTGGTC
CAAGTTCCCG GCTCGGTGCT GCGCATCGAG GCGACGGTGC TGCAGCAGAT CAAACAGTCC
GCGCCGGGCG TGCGCAACCT GATCACCCGC TACTCCGATT GCCTGCTCGC CCAGGTCCTG
CAGTCGGTCG CCTGCAACGC CAGCCACACC ATTGAGGCCC GCTGTGCCCG TTGGCTCCTG
AGCCTGCAGG ACCGCATCGG CGGCGACGTC CTGCCCGTCA CACACGAAGT GCTGGCCGAG
CTGCTGGGCG TGCAACGCTC GTACCTGACG CGCACGCTCC GGACCTTGCA GGAACAGGGT
CTGATCCAGA TCCGGCGTGG GCGCATCATC ATCAAGAGCC GTCCGGCGAT GGAAGAAGCG
ACCTGCGAGT GCCATGGCGC AGTCAAGCGG CACTTCGAGG CCGTATTGGG CGCCGTCTAC
AATGCCAGTG GCACTTTGGT CTCGCTCCGC TCCATGCCCG CGGAAGGCAC GCAGATGTGT
CAGGCCGGAT AG
 
Protein sequence
MLPEIDALLR GNLLLSALRP SDQALLKPHL ELQEFQRGDL LFEAGEDVCC ISFPLGQCVA 
ALVIGLQDGR AVETATVGHE GAIGGVVSQG SLPAFSRAVV QVPGSVLRIE ATVLQQIKQS
APGVRNLITR YSDCLLAQVL QSVACNASHT IEARCARWLL SLQDRIGGDV LPVTHEVLAE
LLGVQRSYLT RTLRTLQEQG LIQIRRGRII IKSRPAMEEA TCECHGAVKR HFEAVLGAVY
NASGTLVSLR SMPAEGTQMC QAG