Gene Mext_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1607 
Symbol 
ID5835751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1795154 
End bp1796302 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content72% 
IMG OID641367405 
Productcytochrome oxidase assembly 
Protein accessionYP_001639077 
Protein GI163851034 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0905771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGT CGACCCATCC GACCCTCGAC CGCTTCGACG CCGTCCCGGC GGCCTCCTAC 
CGCCCCGGGC ACGGCGCGGT GCGCGCGTGG CTCTACCTGC TCGCCGTGCT CGTCGTGGCG
ATGGTCGCCG TCGGCGGCGC GACGCGGCTC ACCGGCTCCG GCCTCTCGAT CACCGAGTGG
CGGCCCGTGA CCGGCGTGGT GCCGCCGCTC GACGCCGCCG ACTGGGCGGT GGAGTTCGAC
AAGTACCGCG ACACGCCGCA GTACCGCATC CTCAACCAGG GCATCGGGCT CGACGGCTTC
AAGACGCTCT ACTGGTGGGA ATGGGGGCAT CGCCTGCTCG GGCGGATCGT CGGCCTCGTG
TTCTTCCTGC CGTTTGCGTG GTTCTGGGCC CGCGGCATGC TCGGGCGCCG CCTCCTCCTC
GGCCTCCTCG GCCTCGGCCT GCTCGGCGGG CTTCAGGGGG CGATCGGCTG GATCATGGTG
GCCTCGGGTC TCCAGCCCGG CATGACGGCG GTGGCGCCGC TCAAGCTCGC CCTGCACCTC
ACCACCGCGA GCCTGATCCT CGCCGGCCTC GTCTGGCTCG CCGCCGGCAC CCGTCCTCGG
GCCCTCGCTC CGGCGCCCGA ACCGGTACGG GTCGTCGCCG GCCTGTTGCC GGCCCTGGTG
CTGGTTCAGA TCTGGCTCGG CGGGCTCGTG GCCGGCTCGA AGGCGGGCCT CCTCTACAAC
ACTTGGCCGG ACATGGACGG CGTTCTCGTG CCGCCGGCCC GAGTGCTGTT CGACAAGGTG
CCCTTCATCG AGAACTTCAT CGACAACCTC GCCTTGGTGC AGTTCAACCA CCGCCTCTTC
GCCTATCTCG TCGTGGTGGT GGCCATCGCC CACGCGATCC AGGCCGCCCG TACGGCGTCC
GGCAGCGCCG CGGCGGGCCG GGCGATGGGC TTGGCGGCGC TGGCAACGGC ACAGATGGGT
CTCGGCATCG CGACCCTCCT GCTGCATGTG CCGCTCTGGG CCGGGCTCGC GCATCAGGTC
TTCGCCATGG CGGTGCTGAT CATGGCGACC GTCCATGCTC GTCTCGCCCG CGGCGTGCCC
GCCGCCACCG CGCCCACGGG GGCGGAGGTG CCGATCGGGC TGGAGGCGCT CGCCGGCCGC
GGCGCCTGA
 
Protein sequence
MRLSTHPTLD RFDAVPAASY RPGHGAVRAW LYLLAVLVVA MVAVGGATRL TGSGLSITEW 
RPVTGVVPPL DAADWAVEFD KYRDTPQYRI LNQGIGLDGF KTLYWWEWGH RLLGRIVGLV
FFLPFAWFWA RGMLGRRLLL GLLGLGLLGG LQGAIGWIMV ASGLQPGMTA VAPLKLALHL
TTASLILAGL VWLAAGTRPR ALAPAPEPVR VVAGLLPALV LVQIWLGGLV AGSKAGLLYN
TWPDMDGVLV PPARVLFDKV PFIENFIDNL ALVQFNHRLF AYLVVVVAIA HAIQAARTAS
GSAAAGRAMG LAALATAQMG LGIATLLLHV PLWAGLAHQV FAMAVLIMAT VHARLARGVP
AATAPTGAEV PIGLEALAGR GA