| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1494 |
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| Symbol | |
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| ID | 5833450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1670848 |
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| End bp | 1671960 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641367294 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001638966 |
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| Protein GI | 163850923 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.775015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGG CAAAGACGGC GGCAACGGTG GCGGAAAGGC CGGTGCTGCG GGTGCTGTCG
GGAGAGGCGA TCTCCCCGCC CCCGGCCTGG ATGATGCGCC AAGCCGGCCG CTACCTGCCG
GAATACCGGG CGACCCGAGC CGAGGCCGGA TCCTTCCTCG ATCTCTGCTA CAACCCGGCC
TTCGCCACCG AGGTGACGCT CCAGCCGATC CGCCGCTTCG GCTTCGAGGC GTCGATCCTG
TTCTCCGACA TCCTCGTCAT CCCCCACGCG CTCGGCCAGG ACGTGCGTTT CGTCGAGGGC
GAGGGTCCGC GCCTCGATGC GCTCGAAGGC CGCGCCCAGT TCGAGCGCCT GCGCGAGGCG
GGCGACCCGG CGATCTTTTC GCACCTCGCA CCGGTCTTCG AGGCCGTCGA GCGCATCCGC
GGGGCGCTTC CCCACGAGAC CACGCTGCTC GGCTTCTGCG GCGCGCCCTG GACCGTGGCG
AGCTACATGA TCGGCGGACG CGGCACGGTG GACCTCGCCC CGGCCCGGGC GCTGGCGGCG
GCCGACCCCG CGCTGCTCGA TGCGCTGCTC GACCGGCTCG TCGCCGTCCA GACCGAATAT
CTCGTGCGCC AGCTCCGCGC GGGCGCCGAC GTGGTGCAGA TCTTCGAGTC GCATGCCGGC
GTGCTGCCGG CTCTTGAGCG TCATGCCGGC GTGTTGCCCG AGTCGAGCGA TGGCGATGCC
CTGAAGCGCT ACTCGCTCGG GCCGATCACG CGGATGGTTC AGGGCGTCCG GGCGCAGGTG
CCGGACGCGA AGATCATCGT CTTCGCCAAG GGATCGGGGC TGGAGGGCCA TGCCCGCGTC
GTGCCCGAGA CTGGCGCGAG CGCCGTCGGC GTCGATTGGG GTGTCGATCT GGCCGCCCTG
CGAGCCCGTG TGCCGGCCTC GACGGTCACC CAGGGCAACC TCCACCCCGA GACCCTGATC
GAGGGCGGGC GGGCCCTGGA CGCGGCCGTG GATGCCATCC TGGCGGCGAC CGAGGGCCTG
CCGCACATCT TCAACCTCGG CCACGGCATC ACCCCGCAGA CGCCGATCGC CCATGTCGAG
CAGATGCTGG CCCGGCTCAG AGGCGGCCGC TGA
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| Protein sequence | MAEAKTAATV AERPVLRVLS GEAISPPPAW MMRQAGRYLP EYRATRAEAG SFLDLCYNPA
FATEVTLQPI RRFGFEASIL FSDILVIPHA LGQDVRFVEG EGPRLDALEG RAQFERLREA
GDPAIFSHLA PVFEAVERIR GALPHETTLL GFCGAPWTVA SYMIGGRGTV DLAPARALAA
ADPALLDALL DRLVAVQTEY LVRQLRAGAD VVQIFESHAG VLPALERHAG VLPESSDGDA
LKRYSLGPIT RMVQGVRAQV PDAKIIVFAK GSGLEGHARV VPETGASAVG VDWGVDLAAL
RARVPASTVT QGNLHPETLI EGGRALDAAV DAILAATEGL PHIFNLGHGI TPQTPIAHVE
QMLARLRGGR
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