| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1400 |
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| Symbol | |
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| ID | 5832590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1574010 |
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| End bp | 1576208 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641367200 |
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| Product | vault protein inter-alpha-trypsin subunit |
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| Protein accession | YP_001638872 |
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| Protein GI | 163850829 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0242423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCGC TTCCCCACTC CCCGCTTCCT CTGCCTCCGC ATTCCCGATC ACCGCTCGCG
CACCCGGCTC CGGGCCTGCC GCGCAACCTT CTGCTCGGGC CGCTGATCGC CCTCCTGCTC
GCCCTCATTG CCGGCATCCC GCCGGCAAGA GCGCAGGATT CGAGGGCGCA GGACGGCAGC
GGCACGCTGC TGCTGCGCTT CGAGGGCGGC GCGCCCGTCG AGGCGCCCCG CCTCAAGGCG
GACGCCGCGA TCAGCGTGAG CGGCCCGACC GCACGGGCGA CGATCACCCA GGCCTTCCGC
AACACGACGA GCGAGTGGGT CGAGGGCACC TACCTGTTCC CGCTGCCGGA GGATGCGGCG
GTCGATACGA TGAAGCTCGT GGTCGGCGAC CGGGTCATCG TCGCCGACAT CCGCGAGCGC
GCGGCGGCGC GGCGCGTCTA CGAGGCGGCA AAGGCCGAGG GCAAGGCCGC CGCGCTCACC
GAGCAGCAGC GGCCCAACCT GTTCACCAAC GCGGTCGCCA ATATCGGCCC TGGCGAGACC
GTGCTGGTGC AGATCGAATA CCAGCAGCCG GTGCGGTCCT CCGCCGGCAC CTATGCCTTG
CGCCTGCCGA CCGTCGCCGC CCCGCGCTAC AGCCCCGCTC CCCCGGCGGT AATGGCCGTC
GTCGAGCGGG GCGCCGCCGA TCCCGTCCCG GATCGCGAAA CGATCGCGGC CCCGGTGCTC
GACCCGGCCC GCCATGCGCC GATCAACCCG CTGACGCTCA CCATCGATCT CAAGGCCGGC
TTCACCCTGG GCCAGGTGCG CAGCGCCACC CATGCGGTCC GTATCGAGGA ACGGTCCGCG
AGCGAACGCC GCATCACGCT CGCCGACGGC GCCACCGCCG CCGACCGCGA CTTCGAGCTG
ACCTGGAATG CGGCCCCCGG CGAGGCACCC TCGATCGGCC TGTTCCGCGA GCGGGTGGCG
GGGGCTGAGG CAGTGCTCGC CGTGGTGACC CCGCCGGAAT CTGCGAGCTC GGCCGCATCC
GTGCCCCGTG ACGTGGTGTT CGTCATCGAC AATTCCGGCT CCATGGGCGG CGCCTCGATG
CGGCAGGCCA AGGCGAGCCT GCTCATCGGC CTCGACCGGC TGGGCGCGCA TGACCGCTTC
AACGTGATCC GCTTCGATCA CAGCTTCGAC ACGCTGTTTC CCGATCTGGT GCCCGCCGAC
GCGGGCCATC TGATGCGGGC CAAAAGCTTC GTGGCCGGGC TCCAAGCGAG CGGTGGCACG
GAGATGCTGG CGCCGCTCCA GGCCGCCCTG CGGGGCGCGA CGCCGGAGGA GACGGGGCGT
CTGCGTCAGG TCGTGTTCCT CACCGACGGT GCCATCGGCA ACGAGGCGCA GATCTTCTCC
GCCATCGCCA CGGAGCGCGG GCGCTCGCGG CTGTTCATGG TCGGCATCGG CTCGGCCCCG
AACGGCTACC TGATGCGCCA CGCCGCCGAA CTCGGTCGCG GCAGCTTCAC CCAGATCGAC
ACGCCCGATC AGGTGACCGA GCGGATGCGC GCCCTGTTGG TGAAGCTGGA AAGCCCCGCC
GTCACCGACC TGACCGCGAC CTTCTCCGAG CCCGGCATCG ATGTGACACC CGCCCGCCTA
CCCGACCTCT ACCGCGGCGA GCCGCTCACC CTCTCGGCCC GGATGGGGCA GGCCCGCGGC
ACCCTGACCC TCACCGGCCG GATCGGCGGA CAACCCTGGC AGACGCAGCT GCATCTCGAT
GCGGCACAGG ACGGGACCGG GATCGGCAAG CTCTGGGCGC GGGCGAAGAT CGCCGAGGCC
GAGACCGCGC GGCTGACCGG CGGGCTCACG GCGGAGGCGG CCGACGCGGC GATCCTGCGG
CTGGCGCTCG ACCACGGGCT GACGACCCGC CTGACCTCGC TGGTGGCGGT GGACGCCACC
CCGCGCCGGC CAGCCGGGAT GCGCCTCGCC AGCACCGAGT TGCCGCTCAA CCTGCCGGCC
GGCTGGGACT TCGAGACGGT GTTCGGCACG CAGGATGAGG CGCCGCAGCT TCCCCCGCCG
CCGCGCCAGC GCCGCGCCGC GGCCCCGGCT ACGCAGATCG CGGCCGCGCA AGCCGTGGCG
CTGCCGCAGA CCGCGACGGA TTTCGAGATC CGCGCATGGC TCGGAGCGCT GCTGCTGGCG
CTCGGTCTCG TCCTCTCCCG CCGCCGGCTC GCAGCGTGA
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| Protein sequence | MLSLPHSPLP LPPHSRSPLA HPAPGLPRNL LLGPLIALLL ALIAGIPPAR AQDSRAQDGS
GTLLLRFEGG APVEAPRLKA DAAISVSGPT ARATITQAFR NTTSEWVEGT YLFPLPEDAA
VDTMKLVVGD RVIVADIRER AAARRVYEAA KAEGKAAALT EQQRPNLFTN AVANIGPGET
VLVQIEYQQP VRSSAGTYAL RLPTVAAPRY SPAPPAVMAV VERGAADPVP DRETIAAPVL
DPARHAPINP LTLTIDLKAG FTLGQVRSAT HAVRIEERSA SERRITLADG ATAADRDFEL
TWNAAPGEAP SIGLFRERVA GAEAVLAVVT PPESASSAAS VPRDVVFVID NSGSMGGASM
RQAKASLLIG LDRLGAHDRF NVIRFDHSFD TLFPDLVPAD AGHLMRAKSF VAGLQASGGT
EMLAPLQAAL RGATPEETGR LRQVVFLTDG AIGNEAQIFS AIATERGRSR LFMVGIGSAP
NGYLMRHAAE LGRGSFTQID TPDQVTERMR ALLVKLESPA VTDLTATFSE PGIDVTPARL
PDLYRGEPLT LSARMGQARG TLTLTGRIGG QPWQTQLHLD AAQDGTGIGK LWARAKIAEA
ETARLTGGLT AEAADAAILR LALDHGLTTR LTSLVAVDAT PRRPAGMRLA STELPLNLPA
GWDFETVFGT QDEAPQLPPP PRQRRAAAPA TQIAAAQAVA LPQTATDFEI RAWLGALLLA
LGLVLSRRRL AA
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