Gene Mext_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1173 
Symbol 
ID5832449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1292784 
End bp1293326 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID641366966 
Productcupin 2 domain-containing protein 
Protein accessionYP_001638646 
Protein GI163850603 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4101] Predicted mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0388903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0358477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC TCGGCGACGG CCACACCCAT GACCATGAGC CTCACGACCA TGAGCCTCAC 
AATCATGACC ACGACGAAGG CGCCGCCGCG CGCTGGAAGC AAGACGGCGT GCGGGTGATC
CCCGGTGACC GGCTCGATCC CAACACGGCG CAGACGCCCG GCATGTTCCG GCAGGCGGCG
GTCAACGCCG CACGGGTCGG TGCCCAGAAG ATCTGGGCCG GCACCGTGGC GATCGAGCCC
GACGCCAAGA CCGGCGTGCA CCACCACGGC GCGCTGGAGA GCGTGATCTA CATCGTCTCC
GGCCAGGCCC GGATGCGCTG GGGCGAGCGC CTCGAATACG TGGCGGAGGC CGGGCCCGGC
GACTTCATCT TCGTGCCGCC CTACGTGCCG CACCAGGAGA TCAACGCCTC GACCGACGAG
CCCCTGCACT GCGTGCTGGT GCGCTCCGAC AACGAGGCGG TGGTGGTCAA CCTGCCCGAT
GTCGAGGCGG CCGAGCGGCC CGAGACGGTC TACTGGGTCG ATCCGATCCA CAAGCACCCG
TGA
 
Protein sequence
MHDLGDGHTH DHEPHDHEPH NHDHDEGAAA RWKQDGVRVI PGDRLDPNTA QTPGMFRQAA 
VNAARVGAQK IWAGTVAIEP DAKTGVHHHG ALESVIYIVS GQARMRWGER LEYVAEAGPG
DFIFVPPYVP HQEINASTDE PLHCVLVRSD NEAVVVNLPD VEAAERPETV YWVDPIHKHP