Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1173 |
Symbol | |
ID | 5832449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 1292784 |
End bp | 1293326 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641366966 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001638646 |
Protein GI | 163850603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4101] Predicted mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0388903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0358477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACC TCGGCGACGG CCACACCCAT GACCATGAGC CTCACGACCA TGAGCCTCAC AATCATGACC ACGACGAAGG CGCCGCCGCG CGCTGGAAGC AAGACGGCGT GCGGGTGATC CCCGGTGACC GGCTCGATCC CAACACGGCG CAGACGCCCG GCATGTTCCG GCAGGCGGCG GTCAACGCCG CACGGGTCGG TGCCCAGAAG ATCTGGGCCG GCACCGTGGC GATCGAGCCC GACGCCAAGA CCGGCGTGCA CCACCACGGC GCGCTGGAGA GCGTGATCTA CATCGTCTCC GGCCAGGCCC GGATGCGCTG GGGCGAGCGC CTCGAATACG TGGCGGAGGC CGGGCCCGGC GACTTCATCT TCGTGCCGCC CTACGTGCCG CACCAGGAGA TCAACGCCTC GACCGACGAG CCCCTGCACT GCGTGCTGGT GCGCTCCGAC AACGAGGCGG TGGTGGTCAA CCTGCCCGAT GTCGAGGCGG CCGAGCGGCC CGAGACGGTC TACTGGGTCG ATCCGATCCA CAAGCACCCG TGA
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Protein sequence | MHDLGDGHTH DHEPHDHEPH NHDHDEGAAA RWKQDGVRVI PGDRLDPNTA QTPGMFRQAA VNAARVGAQK IWAGTVAIEP DAKTGVHHHG ALESVIYIVS GQARMRWGER LEYVAEAGPG DFIFVPPYVP HQEINASTDE PLHCVLVRSD NEAVVVNLPD VEAAERPETV YWVDPIHKHP
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