| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1058 |
|---|
| Symbol | |
|---|
| ID | 5833506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1155984 |
|---|
| End bp | 1156577 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641366853 |
|---|
| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
|---|
| Protein accession | YP_001638534 |
|---|
| Protein GI | 163850491 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2068] Uncharacterized MobA-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.134734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGGT CTGAGCCGCG CATCGGCGCG GTGATCCTCG CTGCCGGCCT CGGCTCCCGC
TTCGGGCAGG CCGCGAAAAT GCTCGCGCCC TATGCCGGCC GGCCGATGGT GCGCCGGTCC
GCCGAAGCCG CCCTGGCCTC GCGCGCCGGG CCGGTCGTCG CGGTGCTCGG CGCCCATGCC
GCGGCGGTGC AGGCCGCCCT TGCCGGGCTC GACCTGAGGC TGGTCGAGAA CCCCGACCCC
GCCGCCGGCC TCTCGACCTC GCTGCGTCTC GGCCTCGCCG CCCTGCCGCC GGAGACCGAG
GCGGCGGTGG TGCTGCTCGG CGACATGCCG CGAATCGGGC CGGCGCATAT CGATGCGCTG
ATCGCGGCCT ATACCGCTGC GATGCCGCGC CCCTCCGCCG TGGTCCCGGT GAGCGATGGG
CGCCGCGGCA ATCCGGTGCT GCTCGACCTC GCCCGCCTCG GTGCCGACCT CGCCGCGCTG
ACCGGCGACC ACGGCGCGGG GCCGATCCTG AAGCGGCGCG GCGACGTACT GGAACTGCCG
GCCGATCCGG CGGTGATCTT CGACGTCGAC ACCCCGGAGG CACTGGAGGG CTGA
|
|---|
| Protein sequence | MTGSEPRIGA VILAAGLGSR FGQAAKMLAP YAGRPMVRRS AEAALASRAG PVVAVLGAHA
AAVQAALAGL DLRLVENPDP AAGLSTSLRL GLAALPPETE AAVVLLGDMP RIGPAHIDAL
IAAYTAAMPR PSAVVPVSDG RRGNPVLLDL ARLGADLAAL TGDHGAGPIL KRRGDVLELP
ADPAVIFDVD TPEALEG
|
|---|
| |