| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0946 |
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| Symbol | |
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| ID | 5834150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1022583 |
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| End bp | 1023647 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641366728 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001638422 |
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| Protein GI | 163850379 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0554878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGAA GCGGACCAGC ATCGAAACGG AACAGGGCGC ACGTGTCGAC CCCGGCTGAA
AAACTGAACG AACTCAGCGG GTGGCGCTTC AGCGTCGCAC CGATGATGGA CTGGACCGAC
CGGCAGTGCC GCGCGTTCCA CCGAACCCTG TCGCGCCGGG CGCGGCTCTA TACCGAGATG
GTGACGACCG GGGCCGTGCT GCACGGGGAC CGGGAGCGGC TGCTCGGTTT CGATGCCTAC
GAGCAGCCGT TGGCGGTGCA ACTCGGCGGC TCCAACCCGG ATGACCTGGC GGCGGCGGCG
CGGATCGCCG CCGATTTCGG CTATGCCGAG ATCAACCTCA ATGTCGGCTG CCCTTCAGAC
CGGGTGCAGG ACGGACGCTT CGGTGCCTGC CTGATGCGCG AGCCGGGCCT CGTGGGTGCC
TGCGTGGCGG CCTTGAAGGC GGCTGTCCCG GTGCCGGTGA CCGTGAAGTG CCGCCTCGGC
GTCGATGATC AGGATATCGA GGAAGCCCTC GATGCCGTGG CCGACGCCGT GGTCGCGGCG
GGAGGCGACG GACTCGTCGT GCATGCCCGC AAGGCTTGGC TCAAAGGTCT CTCGCCGCGC
GAGAACCGGG ACGTGCCGCC GCTCGATTAC GGCCGCGTCG CCCGGCTGAA GCGGGCGCAT
CCGGATCTGC CGATCGCGGT CAATGGCGGG ATCGCCGACA TCGCCGCCGC CAAGGCGAGG
CTCGGCGAGG TCGATGGCGT GATGATCGGC CGGGCCGCCT ATACCGAGCC GGCGCTGCTG
CTCGATGTCG ATGCCGAGTT GTTCGGCGAA CCGGCGCCCG TCGCCGATGC CTTCGCTGCG
ATCGAGGCCT TCGAGCCCAT CGTCGCGGCA GGGCTCGAAC GCGGCCTGCG GCTTCACGCC
TATACCCGGC ACATGCTCGG CCTGTTCAAC GGGCGGCCCG GAGCGCGGGC CTATCGCCGG
CATCTCGCCA CCGCCGGGAT GGGCCCGGAG GCAGGCCTCG CCACGCTGCG CGAGGCGGTG
GCCAAGGTGT CTCGGGAACG TGCGCCGGCT TCCGAAGCGG CCTGA
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| Protein sequence | MARSGPASKR NRAHVSTPAE KLNELSGWRF SVAPMMDWTD RQCRAFHRTL SRRARLYTEM
VTTGAVLHGD RERLLGFDAY EQPLAVQLGG SNPDDLAAAA RIAADFGYAE INLNVGCPSD
RVQDGRFGAC LMREPGLVGA CVAALKAAVP VPVTVKCRLG VDDQDIEEAL DAVADAVVAA
GGDGLVVHAR KAWLKGLSPR ENRDVPPLDY GRVARLKRAH PDLPIAVNGG IADIAAAKAR
LGEVDGVMIG RAAYTEPALL LDVDAELFGE PAPVADAFAA IEAFEPIVAA GLERGLRLHA
YTRHMLGLFN GRPGARAYRR HLATAGMGPE AGLATLREAV AKVSRERAPA SEAA
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