Gene Mext_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0878 
Symbol 
ID5834285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp956311 
End bp957222 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content74% 
IMG OID641366660 
Producttriple helix repeat-containing collagen 
Protein accessionYP_001638354 
Protein GI163850311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0304216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGA CGCGCGACCT GGGAGCACGA AAGCCAGCCA CTTCGCGAGC CGTTTGGCCG 
ACCCTCTCGC CGATCCTGAT CGCGCTGGGC CTCGTCCTTG CCGGACCGGC GGCGGCGCAG
AGCCAGGGCG AGACGCAGTC GCGAGCGGCC CGTGCCAAGG CACCGAGCCC GCCGGTCCAG
CCGATCCAGA TCTGGGACGC GCGCATCGAG GGCGGCGACC TGCGCATGAG CGGCAGCGTG
GGCAAGAGCG GAGTCACCGT GATCCTCGAC GACGACATCT CCGTCCTGTC GGACCGGCGC
GGACGCTTCG AGTTCCGGCT GCCCTACCGG CCGGCGACCT GCGTCGCGAT GGTCAAGGCC
GGCGAGAACG AGCGCGAGGC GGTGGTCGCC AATTGCGCGC CGGAGGGGCC GGCCGGCAAG
GCGGGCGAAC AGGGCCCCGC CGGCCCGCAG GGCAGCGCCG GCCTCCAGGG ACCGCCCGGT
GCCGCCGGGC CGAAAGGCGA TCCGGGCCCG AAGGGTGAGC AGGGGGCCAA AGGCGAGCAG
GGCCTCAAGG GCGAGACCGG GCCAAAGGGT GAAGCGGGTC TGGCCGGTCC TCCGGGCGCG
CCGGGGCCGA AGGGGGATCA GGGCCTCAAG GGTGAGCCTG GACAGAAGGG GGAACCGGGC
TCGAAGGGCG AGCGCGGCCC CAAGGGCGAT CCGGGATCGA AAGGTGAGAC CGCCGCGACG
GTGTCGGCCC CGTTCCGTGT CGTGCGGGCG CGCGCCTGCA CCGATTCGGG CTGTACGCTC
TCCTGCGATG CGGGCGAGGT CCTGGCCTCG GCCACCTGCC AAACGGGCGG CGCGGCGACC
CTCGACGGCG ACACGAAAGC CTCCTGCGCG GCCGGTAGCA GCGGCATGGT CGGAATCTGC
GCCCGGCCCT GA
 
Protein sequence
MPTTRDLGAR KPATSRAVWP TLSPILIALG LVLAGPAAAQ SQGETQSRAA RAKAPSPPVQ 
PIQIWDARIE GGDLRMSGSV GKSGVTVILD DDISVLSDRR GRFEFRLPYR PATCVAMVKA
GENEREAVVA NCAPEGPAGK AGEQGPAGPQ GSAGLQGPPG AAGPKGDPGP KGEQGAKGEQ
GLKGETGPKG EAGLAGPPGA PGPKGDQGLK GEPGQKGEPG SKGERGPKGD PGSKGETAAT
VSAPFRVVRA RACTDSGCTL SCDAGEVLAS ATCQTGGAAT LDGDTKASCA AGSSGMVGIC
ARP