Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0878 |
Symbol | |
ID | 5834285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 956311 |
End bp | 957222 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641366660 |
Product | triple helix repeat-containing collagen |
Protein accession | YP_001638354 |
Protein GI | 163850311 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0304216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGA CGCGCGACCT GGGAGCACGA AAGCCAGCCA CTTCGCGAGC CGTTTGGCCG ACCCTCTCGC CGATCCTGAT CGCGCTGGGC CTCGTCCTTG CCGGACCGGC GGCGGCGCAG AGCCAGGGCG AGACGCAGTC GCGAGCGGCC CGTGCCAAGG CACCGAGCCC GCCGGTCCAG CCGATCCAGA TCTGGGACGC GCGCATCGAG GGCGGCGACC TGCGCATGAG CGGCAGCGTG GGCAAGAGCG GAGTCACCGT GATCCTCGAC GACGACATCT CCGTCCTGTC GGACCGGCGC GGACGCTTCG AGTTCCGGCT GCCCTACCGG CCGGCGACCT GCGTCGCGAT GGTCAAGGCC GGCGAGAACG AGCGCGAGGC GGTGGTCGCC AATTGCGCGC CGGAGGGGCC GGCCGGCAAG GCGGGCGAAC AGGGCCCCGC CGGCCCGCAG GGCAGCGCCG GCCTCCAGGG ACCGCCCGGT GCCGCCGGGC CGAAAGGCGA TCCGGGCCCG AAGGGTGAGC AGGGGGCCAA AGGCGAGCAG GGCCTCAAGG GCGAGACCGG GCCAAAGGGT GAAGCGGGTC TGGCCGGTCC TCCGGGCGCG CCGGGGCCGA AGGGGGATCA GGGCCTCAAG GGTGAGCCTG GACAGAAGGG GGAACCGGGC TCGAAGGGCG AGCGCGGCCC CAAGGGCGAT CCGGGATCGA AAGGTGAGAC CGCCGCGACG GTGTCGGCCC CGTTCCGTGT CGTGCGGGCG CGCGCCTGCA CCGATTCGGG CTGTACGCTC TCCTGCGATG CGGGCGAGGT CCTGGCCTCG GCCACCTGCC AAACGGGCGG CGCGGCGACC CTCGACGGCG ACACGAAAGC CTCCTGCGCG GCCGGTAGCA GCGGCATGGT CGGAATCTGC GCCCGGCCCT GA
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Protein sequence | MPTTRDLGAR KPATSRAVWP TLSPILIALG LVLAGPAAAQ SQGETQSRAA RAKAPSPPVQ PIQIWDARIE GGDLRMSGSV GKSGVTVILD DDISVLSDRR GRFEFRLPYR PATCVAMVKA GENEREAVVA NCAPEGPAGK AGEQGPAGPQ GSAGLQGPPG AAGPKGDPGP KGEQGAKGEQ GLKGETGPKG EAGLAGPPGA PGPKGDQGLK GEPGQKGEPG SKGERGPKGD PGSKGETAAT VSAPFRVVRA RACTDSGCTL SCDAGEVLAS ATCQTGGAAT LDGDTKASCA AGSSGMVGIC ARP
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