| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0798 |
|---|
| Symbol | |
|---|
| ID | 5831761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 855040 |
|---|
| End bp | 856914 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641366575 |
|---|
| Product | PAS sensor protein |
|---|
| Protein accession | YP_001638275 |
|---|
| Protein GI | 163850232 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCG CGGATGGCGC GCTTTGGCCT CCTGATGTCA GCGGGATGGC TAAGAATATT
CGTACATACG ACTGGTCTGC GACGGCGCTC GGTTCGATCA CGGATTGGAC AAGCCGCCTC
CGGCTGACGG TCGAGATGCT CTTAGTCAAT CCGCTGGTCG CCTACGCGGT CTGCGGGCCT
GAGCGGATCC TGATCTACAA CGATGCGGCT GCTGTGATGC TTGGCCCGAT GCATCCCGGT
GCGCTCGGGC AATCTACATC AACCTTCTTC AGCGAAGCAC GTAAGGTTAT GGAGCCGCTG
TATGACCGAG CCTTCGCTGG CAGGGCGATC AAGGTCGAAG CGCAGCCCAT CGACCTGCAC
GGACGAAGCC GCCCCAGCGC CTTTGATCTC ATCTTGACGC CGATCCCCGA GGAGGATGGG
ACCATCGCCA ACATACAGGT TGTCGGCTTC GATGTAAGCG CACGCTTGGC CGCGGAAGAG
GATCGGGACC GAACGCTGCA AGGTTTGCGC GCGAGTGAGG CGCGGCTGCG GCTTGCTTTG
GACGCTTCAC GCGCAGGCGT ATGGACGTAT GACCCGGCTG CGAAGACGTT CGAGGTGGAC
GCCCGCACGG CCGAGGTCAC AGCTATCGCG CCCGGAGCGA CGTTGTCCGC GTCCGTGATT
TGGCGGGCAA CGCACTCAGA CGACCGCGCC CTGCTACAGG CGAGGCTCAT GGATATGCTC
GATCCTCGGG GCGATCACTG GAACGAAGCT TTTGCTCGGT TCGTGCACCC CGACGGAACA
GTGCACTGGA CGCAGATCCG AGCGCAGTCT GTCCTTGAAG GCAGTGGTTC AGAGCGACGG
ACAGTGCAGG TACTGGGCAC GCTCCTCGAC ATAACGGAGA GCAAACAGGC CGAGGCTGCT
CTGCGTGAGA GCGAGCAGCG CTTCCGTGCC GTGGCCAATC TGGGCCCGGA CTTCCTCTGG
AGCAGCGATC CTGAGGGCCG GGCGACTTGG TTCAGCGAGC GCTGGTACGC TTATAGTGGA
CAGTCCGACG TTGAAGCGTT GGGATACGGC TGGTATGAAG TCATTCATCC GGAAGACCGC
GAACCAACCA TGGCGCGCTT CTTCGAGGTC GCGAAGCAAG GCAAGGTCTA CAGCCACGAG
TACCGCATCC GTCGACAGGA CGGTGTCTAC CGCTGGTTCT TGGTCCGAGC CGGCCCTGTT
CGCGACGGAG CTGGGCAGAT CACGCAGTGC TATGGAGCTG TGATCGACAT CCACGATCTG
CATGAGTTGC AGCAGCAGCA GGCGATCATG GTTGGAGAGT TGCAGCACCG CACTCGCAAC
CTGATCACGG TTGTCCGGTT GATTGCGCAG CAAACTCTGG CACAGACTGG CCCGACCGAG
CGCTTCCGGA CTTGCTTCAA CGATCGGCTC GCTGCCCTCT CGCGCGTGCA GGGACTGCTC
TCTCGCTCAG ACCAGCAGCC AATCACCATC CGGGCTCTGA TCCGTGCGGA GCTCGATGCG
CTTGGTTTTG CAGGGGTGCA GGCGCGTGTG GTTCTGGAGG GCCCTCCCGT GGTGCTGCGC
AAGGCCAGCG TGCAGACGCT CGCGTTGGCG CTCCACGAGT TAGCAACCAA CGCGCGGAAG
TATGGCGCGC TTGCCGGCGA GCAGGGCGAG CTCTGGGTAG ATTGGAACAG CTACACCACA
GAGAATGGTC AGCAGCGCCT TTCCTTGATG TGGCTCGAAG AGGGGATCAG CACGCCGCCC
GAGGGCGGTC CGATCCGGCG CGGCTACGGA CGAGAGCTGA TCGAGAAAGC ACTACCCTAC
GCACTGAATG CGCGAACCAG CTACGTTCTC GGCAATAGCG AATTGCGGTG TGACATTGAT
TTGCCTCTTG CTTGA
|
|---|
| Protein sequence | MASADGALWP PDVSGMAKNI RTYDWSATAL GSITDWTSRL RLTVEMLLVN PLVAYAVCGP
ERILIYNDAA AVMLGPMHPG ALGQSTSTFF SEARKVMEPL YDRAFAGRAI KVEAQPIDLH
GRSRPSAFDL ILTPIPEEDG TIANIQVVGF DVSARLAAEE DRDRTLQGLR ASEARLRLAL
DASRAGVWTY DPAAKTFEVD ARTAEVTAIA PGATLSASVI WRATHSDDRA LLQARLMDML
DPRGDHWNEA FARFVHPDGT VHWTQIRAQS VLEGSGSERR TVQVLGTLLD ITESKQAEAA
LRESEQRFRA VANLGPDFLW SSDPEGRATW FSERWYAYSG QSDVEALGYG WYEVIHPEDR
EPTMARFFEV AKQGKVYSHE YRIRRQDGVY RWFLVRAGPV RDGAGQITQC YGAVIDIHDL
HELQQQQAIM VGELQHRTRN LITVVRLIAQ QTLAQTGPTE RFRTCFNDRL AALSRVQGLL
SRSDQQPITI RALIRAELDA LGFAGVQARV VLEGPPVVLR KASVQTLALA LHELATNARK
YGALAGEQGE LWVDWNSYTT ENGQQRLSLM WLEEGISTPP EGGPIRRGYG RELIEKALPY
ALNARTSYVL GNSELRCDID LPLA
|
|---|
| |