| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0276 |
|---|
| Symbol | |
|---|
| ID | 5833047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 309876 |
|---|
| End bp | 311369 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641366060 |
|---|
| Product | carboxypeptidase Taq |
|---|
| Protein accession | YP_001637771 |
|---|
| Protein GI | 163849728 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.591351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCTT ACGCGACGCT CACCGCCACC TTCGCCCGGC TCGGCGCGCT GGAGGATGCG
AGCGGCATCC TCGGCTGGGA CACGCAGACC CAGATGCCGG ACGGCGCCTC CGATACCCGC
GGCGAGCAAC TGGCCGTGCT GAGCGTGCTC GCCCACGAGA TCCTCACCGA CCCGCGCAAC
GCCGAGCGGT TCGACGCGGC GGAGGCGGAG GGGCACCTCG GCGAATGGGA GCGGGCCAAC
CTGCGCGAGA TGCGCCGGGC CTATGCCCAC GCGGCGGCGG TGCCGGGCGA TCTCGTCGAG
GCGGCCTCGA AAGCGGCGAC GCGCTGCGAG ATGGTCTGGC GCGAGGCGCG GCGCGATTCG
GATTTCGCGC GGCTGCGTCC CTATCTCGAA GAGGTGCTGC GGCTGCAACG CCGCGTCGGT
GAGGCCAAGG GGGCGGCGCT CGGCCTTGCG CCCTACGACG CGCTGCTCGA CGGATACGAC
CCCGGCATGC GGAGGGCGCG CATCGATCCG ATCTTCGCGG CGTTGCGCGC CGTCCTGCCG
GATCTCGTCG TCGCGGCGCG CGAGCGGCAG GCGGCTGACG CCCCTCCCCT GCCGCTGCCG
GGTCCGTTTC CGGTCGCGAC CCAGCGGGAG ATCGGCCTGC AGCTGATGCG GGCCGTGGGG
TTCGATTTCG CGCGCGGACG ACTCGATGTC AGCCTGCACC CGTTCTGCGG CGGTGCCACC
GACGACGTGC GCATCACCAC CCGCTACGAC GAGGCGAGCG CCACCGGGGC GCTGATGGGC
GTACTGCACG AGACCGGCCA CGCGCTCTAC GAGCAGGGCC GCCCGGCCGC ATGGCGCCAC
CAGCCGGTGG GGCAGGCCCG CGGCATGAGC CTGCACGAGA GCCAATCGCT GCTCGTCGAG
ATGCAGGCCT GCCGCTCGGC CGAGTTCTGC GCCTACCTTG CGCCGACCCT GCGCGCGGCG
TTCGGCGGCG AAGGGCCGGC CTGGGAGGCG GAGAACCTGC ACCGTCTCTA CACCCGCGTC
GAGCCGGGCT TCATCCGGGT GGATGCCGAT GAGGTGACCT ACCCGGCTCA CATTCTGCTG
CGATACCGCT TGGAGACGGC GATGATCGCC GGCGACCTCA CGGTGGCCGA CCTGCCGGGT
GCCTTCAACG ACGGTATGAA GGAATTGCTG GGGTTCACCG TGCCCGACGA CCGGCACGGC
TGCCTTCAGG ACATCCACTG GCCGGGCGGC AGCTTCGGTT ACTTCCCGAC CTATACTCTC
GGGGCACTGG CCGCCGCGCA GCTCTTCAAG GCCGCCTGCG CCGCGCATCC CGGTATCCGC
CCGGCCCTCG CCGAGGGCGA TTTTTCGCAG TTGCGCGGCT GGCTGCGGGA GAACGTCCAT
GCCCGCGCGA GCCTGATGGA AACCGATGAA CTGCTGACCG CCGCGACCGG AAAGCCGCTC
GGGGCGGATG ATTTCCTGGC ACATCTGCGC AGCCGTTATC TTGGGACGGT GTAG
|
|---|
| Protein sequence | MQAYATLTAT FARLGALEDA SGILGWDTQT QMPDGASDTR GEQLAVLSVL AHEILTDPRN
AERFDAAEAE GHLGEWERAN LREMRRAYAH AAAVPGDLVE AASKAATRCE MVWREARRDS
DFARLRPYLE EVLRLQRRVG EAKGAALGLA PYDALLDGYD PGMRRARIDP IFAALRAVLP
DLVVAARERQ AADAPPLPLP GPFPVATQRE IGLQLMRAVG FDFARGRLDV SLHPFCGGAT
DDVRITTRYD EASATGALMG VLHETGHALY EQGRPAAWRH QPVGQARGMS LHESQSLLVE
MQACRSAEFC AYLAPTLRAA FGGEGPAWEA ENLHRLYTRV EPGFIRVDAD EVTYPAHILL
RYRLETAMIA GDLTVADLPG AFNDGMKELL GFTVPDDRHG CLQDIHWPGG SFGYFPTYTL
GALAAAQLFK AACAAHPGIR PALAEGDFSQ LRGWLRENVH ARASLMETDE LLTAATGKPL
GADDFLAHLR SRYLGTV
|
|---|
| |