Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0273 |
Symbol | |
ID | 5833585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 299758 |
End bp | 302517 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641366056 |
Product | helicase domain-containing protein |
Protein accession | YP_001637768 |
Protein GI | 163849725 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC AGTTCTCCCC CGGCGACCTC GTGCGTGCGC GCGGCCGGGA ATGGGTCACG CTGCCCCACG ACGATCCGGC CGCGCTCCGT TTGCGTCCGC TCTCAGGCAC CGAGGCCGAC GCGCTGACAA TCCTGCCAGC TCTGGAGCGG ATGCCGGTCG AGGCCGCACA CTTCGCACCG CCCGAGGTCG ACGTGCGCGG CACGCAGGAA AGCGCCCGCC TTCTGGCAGA GGCTCTCCGC CTGTCCCTGC GCCGTGGTGC TGGCCCGTTC CGCTCGTCGG CGCGCGTCAG CTTCGAGCCG CGCGCTTATC AACTCGTGCC GCTGCTGATG GCGATGCGCT TAGACGTTGT ACGTCTGCTC ATCGCCGACG ACGTCGGCAT CGGCAAGACC GTTGAGGCCG GCCTCATCCT CCGCGAACTC CTCGACCGTG GCGAGATCGA GCGCTTCTGC GTCCTGTGCC CGCCGCACCT CGTCGAGCAG TGGGTCGGCG AACTGCGCGC CAAGTTCGAC ATCGAGGCCG TCGCCGTCAC ATCCGCGTCC GCGCCGCGCC TGGAGCGGAA GGTCGTCGGA ACCCAAAGCC TGTTCGAGGT CCACCCCTTC ACGGTCGTCA GCCTGGACTA CATCAAGGCT GAGAAGCGCC GTGAGAGCTT TGCGGCCTCG TGTCCGCCCT GCGTCGTCAT CGATGAAGCT CACGCCTGCG TCGGTACCCA CGGCAGCCGG CAGCGTCGCT ATCGCCTGTT GCAACGTCTC GCCAAGGACG CGGCGCGGCA TATGCTACTT CTCACCGCGA CCCCGCACAG CGGCGATGAG GAGGCCTTCG ACCGGTTGCT GAAGCTGCTC GATGAGAGCT TCGCGATGGA CGGCCTCGAC ACCAATGCCG GCCGTATCGC GCTCGCCCGT CATTTCGTGC AGCGTCGCCG GAAGGACATC CTCGAGCAGA AATGGGAATC CGATCAGATC TTCCCCCGGC ACGAGAAGCT CGATCGCCCA TACTCCCTCG GCACGGAGCA CGGCGCGTTC CACGACGCCG TCCTCGACTA CTGCCTCGAT CGCATCGAGG ACGCGGGCGA CGGCACGCAC CGGCAGCGGC TCACGCTCTG GTCAACCTTG GCGCTGTTGC GCTGCGTCGG CTCATCGCCG GCCGCCGCCC TCAACGCGCT CCGCAACCGG CAGGACGGTG ATCCCGAGCG CCTATCGATG CAGGTCCTCG ACGAGGAGGA CGAGGATACC GAGGCCGTCG ACGCCGAGCC GAGCGCCTAC CTCGGGACCG ATCCGGCCCT CGCCAAGCTG ATCCGGCAGG CGGAGGCTCT GGTCGGAAAG CCAGATCCCA AGCTCGCGAT GATGATCAAG GAGCTGAAGC CCCTGATCGC CGCCGGTGCG AACCCGGTCG TGTTCTGCCG GTACATCGCT ACGGCCGAGT ATGTCGCTGC AGCGCTTCGC AAGGCCTTTC CAAGTCTCGC CGTCGAAAGC GTCACCGGTC TGCTCGTCCC GGACGATCGC CGTGACCGGG TCGAGGGCAT GGCCGAGGAG CCGCAACGCC TCTTGGTCGC GACGGACTGT CTGTCCGAGG GCATCAACCT TCAGATGCTG TTCGACGCTG TCGTCCACTA CGACCTGTCG TGGAACCCGA CGCGGCATCA GCAGCGCGAA GGGCGTGTCG ATCGCTTCGG CCAACCAGCG CCCTTGGTGA AGTCCATGCT GCTGTTCGGT TCGGACAGCC TGATCGACAG CGCGGTCCTC AGCGTGATCC TGAGGAAAGC CGAGCGGATC CGGAAGGATC TCGGCGTCAT TATCGCCCTG CCCGAGGATC GCCAAGTGAT CTCCGGCGCG CTCCTGAACG CGATGCTAGA GCACCGCGGG CGACCCGGTG CGCAGAGACA GTTCGATCTG TTCGCGAAGG AAGCCGACGC CCTCTCAGCA TCCTGGCGCG ATGCCGAGGA GGGCGAGAAG CGGTCACGCG CGCGCTACGC GCAGAACGCC CTCAAGCCTG CCGAGGTGAT GCCGGAATGG GAGAGCTGGC GCGCGATCAT CGGCGGACCC GATCGGGTCG AGCGGTTCGT CGCCCATGCC ATGAACCACT TCAACACGGC GCTGGAGCCC ACGCGCGGTG CAACGTTCCG CGCCGATCTT GCCAAGCTGC CGCCGGCGAT CACCGAGCGT CTGGACGCCA GTGGCGTCAG AGGTGAGGTG CGGATTAGCT TCGAGGCTAA AGCGCCAGCC GGTGCAGTCA CCGTCGGCCG GGCACATCCG ATCGCCGCGA CCCTAGCCGA GAGCCTGCTC GAGACCGCGC TCGACCCCAA AAGCGAGACC GGCTTCGAAC TCGCCCGAAC CGGTGTGTGG AGCACCAGCG CCGTCGAAGC CATGACGACG GTCGTGCTGG TCCGTCTGCG CCACAAGCTT ACCGTACACG GACGATCGGA GCGCATGCTG CTCGCAGAGG AGGCCGTCAC CCTGGCCTTC GCGGGAGCAA ACGCGACGGC GATCGCCGAC GGCGAGACCG CGCATCAGCT GATCGAGGCA CCCGCCAACG GCGACCTCGC CGAGACCGCA CGCCACCGCC TGATCGAGAG GGCCCGCGAG CGGGTTTTGA GCGCGTGGAT GCCCGCAATC GACGCCTACG CCACGCAGCG CGGCGAAGCG CTCGAGGCCG ACCACCGCCG CGTCCGTACG GCAGCCCAGG GCACTCCCCG GGTCACGGTC GAGCCGATCC TACCCGCCGA CATCGTCGGC CTTTACGTCC TCACGCCCGG AGATCTGTGA
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Protein sequence | MTVQFSPGDL VRARGREWVT LPHDDPAALR LRPLSGTEAD ALTILPALER MPVEAAHFAP PEVDVRGTQE SARLLAEALR LSLRRGAGPF RSSARVSFEP RAYQLVPLLM AMRLDVVRLL IADDVGIGKT VEAGLILREL LDRGEIERFC VLCPPHLVEQ WVGELRAKFD IEAVAVTSAS APRLERKVVG TQSLFEVHPF TVVSLDYIKA EKRRESFAAS CPPCVVIDEA HACVGTHGSR QRRYRLLQRL AKDAARHMLL LTATPHSGDE EAFDRLLKLL DESFAMDGLD TNAGRIALAR HFVQRRRKDI LEQKWESDQI FPRHEKLDRP YSLGTEHGAF HDAVLDYCLD RIEDAGDGTH RQRLTLWSTL ALLRCVGSSP AAALNALRNR QDGDPERLSM QVLDEEDEDT EAVDAEPSAY LGTDPALAKL IRQAEALVGK PDPKLAMMIK ELKPLIAAGA NPVVFCRYIA TAEYVAAALR KAFPSLAVES VTGLLVPDDR RDRVEGMAEE PQRLLVATDC LSEGINLQML FDAVVHYDLS WNPTRHQQRE GRVDRFGQPA PLVKSMLLFG SDSLIDSAVL SVILRKAERI RKDLGVIIAL PEDRQVISGA LLNAMLEHRG RPGAQRQFDL FAKEADALSA SWRDAEEGEK RSRARYAQNA LKPAEVMPEW ESWRAIIGGP DRVERFVAHA MNHFNTALEP TRGATFRADL AKLPPAITER LDASGVRGEV RISFEAKAPA GAVTVGRAHP IAATLAESLL ETALDPKSET GFELARTGVW STSAVEAMTT VVLVRLRHKL TVHGRSERML LAEEAVTLAF AGANATAIAD GETAHQLIEA PANGDLAETA RHRLIERARE RVLSAWMPAI DAYATQRGEA LEADHRRVRT AAQGTPRVTV EPILPADIVG LYVLTPGDL
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