| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0202 |
|---|
| Symbol | |
|---|
| ID | 5831844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 217798 |
|---|
| End bp | 218946 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641365987 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001637699 |
|---|
| Protein GI | 163849656 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4671] Predicted glycosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.45206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC CGATTGCGTT TTTTGTCCAT CATCAGGGCC GGGGCCATGC CAACCGCACC
ATGGCGGTGG CCGCCGAGTT CGCCCGCGAC CGTCCGGTCT CGGTGCTGAC CGCCGGCCCG
CACCTGTTCG ACGGATTTTC CCGCGACATC GAGATCGTGA CGCTGCCGAA CATGATCGGC
GCGGCGGTGC CGACCCCGCG CCTCTACGCG GAGCCGACGC CGCCGGTGAT GCACTGCGTG
CCGCTGGGGC TCGCCGAAAT GCGTCGCACC ATGCGCCAGA TCCTCGACCA TCTCGACGAG
CGCGCGGCCG GTCTGTTCGT GGTCGACGTG TCGGCGGAGA TCGCGATGCT CGCGCGCATC
GCCAGTGTCC CCGCGGTCCA GATCCGCATG CACGGCGACC GCAACGACAT CGCCCATCTC
GGCGCCTACG AGGCCTGCGT CGGAATGCTC GCCCCCTTCG ACGAACGGCT GGAGCAGGAC
GACTACCCGG CGCATCTGCG CGACAAGACG TTCTATAGCG GCGGGCTCTG CACCAGCGTC
GATCGCGTGC CGGATCGTGC CGAGGCGCGG GCCCGTCTCG GCCTCGACCC GCAGCGCGAG
ATCGTCGTCG CGGTCACCGG CGGCGGGGGA AGCGGCACGC CCTACGCGCC GCTGACGGTC
GCCGCCCGCG CCGCGCCCGA CGCACTCTGG CTGACTCTGG GGCCGACCCA CCGCGAAGGC
CATGAGACCG ACTTCGCCAA CCTGCGCGAA CTCGGCTGGG TGCCGTCGGT CACCGACTAT
CTCGCGGCGG CCGACATCGT GGTCGCCTCG GCGGGCGACA ACACGGTGCA CGAAGTCGCG
CGCGTGGCGG GGCGCCTGAT CGTCATGCCG GAATGGCGCT ATTTCGGCGA GCAGGCCCGC
AAGGCCGAGG CTTTGGTCCG CTTCGGCGCC GCCGTGCAGG CGCCCCATTG GCCCGGCGAC
TTTCACGGAT GGCGCGATCT TCTCGACCGC GCCCGCAGCC TCGACGGGAC CATCCTGCGC
AGCCTCTACG CACCGGACGC CGCCACGCGC GCGGCCGGTT GGCTCGAAGG GCTCACCGAC
GCGCTCTGGC AGGGCGGATC GGCCGTGCAG GAGCCGGACG CCACGCCGCT GCGCGTCGTC
GCCGGCTGA
|
|---|
| Protein sequence | MKKPIAFFVH HQGRGHANRT MAVAAEFARD RPVSVLTAGP HLFDGFSRDI EIVTLPNMIG
AAVPTPRLYA EPTPPVMHCV PLGLAEMRRT MRQILDHLDE RAAGLFVVDV SAEIAMLARI
ASVPAVQIRM HGDRNDIAHL GAYEACVGML APFDERLEQD DYPAHLRDKT FYSGGLCTSV
DRVPDRAEAR ARLGLDPQRE IVVAVTGGGG SGTPYAPLTV AARAAPDALW LTLGPTHREG
HETDFANLRE LGWVPSVTDY LAAADIVVAS AGDNTVHEVA RVAGRLIVMP EWRYFGEQAR
KAEALVRFGA AVQAPHWPGD FHGWRDLLDR ARSLDGTILR SLYAPDAATR AAGWLEGLTD
ALWQGGSAVQ EPDATPLRVV AG
|
|---|
| |