| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4119 |
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| Symbol | glgX |
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| ID | 5802599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 4400808 |
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| End bp | 4402796 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641341897 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_001608402 |
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| Protein GI | 162421589 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.548863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAT TAACCCATGG ATCACCGACA CCTTCTGGCG CCCACTTTGA TGGGAAGGGC
ATTAATTTCA CACTATTTTC AGCCCATGCT GAACAGGTGA CGTTGTGTCT GTTTGATGAG
CAGGGGCAAG AGCGGCAGAT AGCCATGCCT GCTCGTACTG GTGACATCTG GCATGGCTAT
CTTCCCGGCG GCAAGCCGGG GCAACGCTAT GGTTACCGGG TCAGCGGGCC TTTCGAGCCC
AGTCGAGGCC ACCGTTTTAA CCCACATAAG TTGTTGATAG ACCCCCGAAC TCGTGCGTTA
GAAGGCAAGG TTGGTGATGA TCCCCGCTTT ACCGGTGGCG TTAGCCAGCC CGATGTCCGC
GACAGTGCGG CGGCGTTACC TAAATGTCTT GTGATACACG AGGAATATGA CTGGCAGGGG
GATAAACCGC CCGCCATTCC TTGGGGCAAT ACCGTGATTT ATGAAGCCCA TGTCCGTGGT
TTAACCCAAT TACATCCTGA TATTCCGCCA GAGCTGCGCG GTACCTATGC CGCCTTGGCA
CACCCTGCTC TGATTGAACA TCTCAAAACA TTGGGGATTA CCACACTGGA GTTGCTGCCA
GTGCAATTTC ATATTGATGA ACCCCGGCTA CAAAAAATGG GGCTGAGCAA TTACTGGGGC
TATAACGTGT TAGCGCCCTT TGCGGTGGAT CCAGATTATG CCTCGGGCCG CGAGGGCATA
TCACCGCTGA GAGAACTACG GGATGCGGTT AAAGCCCTGC ATAACGCGGG CATTGAAGTC
ATTCTGGATG TGGTGTTCAA CCACAGCGCT GAGTTGGATG TCTTCGGCCC GACCTTGTGT
CAGCGTGGTA TCGACAATGC CAGCTACTAC TGGCTGACCC CCGATGGTGA ATACGACAAC
ATCACGGGCT GCGGCAATGC ACTGCGCCTC AGTCATCCGT ATGTCACACA GTGGGTTATT
GATTGCCTAA ATTATTGGCG CGATAGCTGC CATGTGGACG GCTTTCGTTT TGACTTAGGC
ACGGTACTGG GCCGCACACC GGCGTTCGAT CAACATGCGC CTTTATTTGC CGCCTTGGCG
GCCGATGAGC GGCTCAGTGC CTGCAAATTG ATTGCAGAAC CTTGGGATAT CGGTCTGGGC
GGTTATCAAT TGGGGAACTT CCCCACCGGC TTTAGCGAAT GGAATGACCA GTACCGCGAT
GCCATGCGCG GTTTCTGGCT ACGAGGGGAG GTGCCGCGCG GTACCTTTGC CCAGCATTTT
GCTGCTTCAA GCAGCCTGTT TGAACAGCGA GGGCGCTTAC CCTCTGCCAG CATTAATCAA
ATTACCGCCC ATGATGGTTT CACCTTGCTG GATTTGCTGT GTTTTAACCA AAAACATAAC
CAAATGAATG GCGAAGAAAA TCGTGATGGC AGTGATAACA ACCATAGCAA TAATTTTGGT
TGTGAAGGCT TGGTGGCTGA CGCGGCTATC TGGCAACGGC GTAAAGCCTG TCAGCGGGCG
CTACTGACCA CCTTATTACT CTCGCAGGGA ACGCCGATGT TACTGGCCGG TGACGAACAG
GGCCACAGCC AGCAAGGCAA CAACAATGCT TATTGTCAGA ACAACATCCT CACCTGGCTC
GATTGGGGCA GTGCGGATCG TGCATTAATG ACGTTTACCG CTGACCTTAT CCGGCTGCGC
CAGCAAATCC CAGCCCTGAC TCAGGACCAA TGGTGGCAGA GCGGCGATAG TAATGTGCAA
TGGTTGGATA GTCAGGGACA GGCGCTGAGT GATGCTGCTT GGGAGCAAGG CTGCCAGCAG
CAACTACAGA TTTTGTTATC TCAGCGCTGG TTGGTGCTCA TCAATGCCAC TGATCACGAG
TGTGAAATGC ACTTACCTGA AGGGGAATGG GAGGGGATTC CTCCCTTTGG GGTGTCAGAC
CATGCGGAGC GATTAACCAC ATGGCGCGGG TCCGCGCATA CCATTTGTGT GCTCATAAAG
AGAGATTAA
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| Protein sequence | MAVLTHGSPT PSGAHFDGKG INFTLFSAHA EQVTLCLFDE QGQERQIAMP ARTGDIWHGY
LPGGKPGQRY GYRVSGPFEP SRGHRFNPHK LLIDPRTRAL EGKVGDDPRF TGGVSQPDVR
DSAAALPKCL VIHEEYDWQG DKPPAIPWGN TVIYEAHVRG LTQLHPDIPP ELRGTYAALA
HPALIEHLKT LGITTLELLP VQFHIDEPRL QKMGLSNYWG YNVLAPFAVD PDYASGREGI
SPLRELRDAV KALHNAGIEV ILDVVFNHSA ELDVFGPTLC QRGIDNASYY WLTPDGEYDN
ITGCGNALRL SHPYVTQWVI DCLNYWRDSC HVDGFRFDLG TVLGRTPAFD QHAPLFAALA
ADERLSACKL IAEPWDIGLG GYQLGNFPTG FSEWNDQYRD AMRGFWLRGE VPRGTFAQHF
AASSSLFEQR GRLPSASINQ ITAHDGFTLL DLLCFNQKHN QMNGEENRDG SDNNHSNNFG
CEGLVADAAI WQRRKACQRA LLTTLLLSQG TPMLLAGDEQ GHSQQGNNNA YCQNNILTWL
DWGSADRALM TFTADLIRLR QQIPALTQDQ WWQSGDSNVQ WLDSQGQALS DAAWEQGCQQ
QLQILLSQRW LVLINATDHE CEMHLPEGEW EGIPPFGVSD HAERLTTWRG SAHTICVLIK
RD
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