| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3930 |
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| Symbol | epaO |
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| ID | 5802408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4180738 |
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| End bp | 4181622 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641341719 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001608229 |
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| Protein GI | 162419017 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTTGA CGGAGATTGA CGGTGAGGGC GTTTATCTGC CACTGCATTA TGGCGGCCAA
GAGTGTGGGT TGTGGTTATC ACAATCCTGT TGGCAGCACT GGCTGAACAC GACGTTGGCA
ACCGATAACC CCCAGTTGTT GGCCGCAGAG TTAGTGATCG CCATGGCTAA TTGGGCCGTC
ACCCCATTGT TAGCGCTGTT TACCGATCTG GTGGTATTGG CCGAGTCACC ACAGAAGAGG
TCACTACCAA AGCAGTGGGC GGTGACGGTG GCTTTCGAGC TGGAGGGACA GCCGATTATC
GGTGTGTTAC TGGATTGGCC GCAGGCGGCA TTGGCCGACA CTTTGTCTCA TTGGCCGTGC
GAAGCGGTCA CCGCCCCTGA TTTGCTTTGG CAATCTGGAT TGGTGGCGGG TTGGTGCCAC
TTATCATTGC GTCAATTACA GCAGTTAAGG CCGGGCGAGG GTTTACGCCT CTCTATGGCG
GCGGAATTGG ATAAAGAAGC GTGCTGGTTA TGGCATCACG CATCGCCACA AATTTATATC
AAGCTAGAGG GTGGGAACAG AATGACAATT CAACAGATTA ATGAAGCGAG TGACCCGCTG
GCCTGCGGCA GTCGCGCTGA ATCACCGCCT CTGGCGGCGG TACAACTTGA GGATTTACCG
CAAACGCTGG TGATGGAAAT TGGCCGTTTG ACCTTGCCTC TGGGGGAGAT AAAACAACTC
GCGGTTGGTC AGACGCTGGC GTGCCAAACC CACTGTTATG GCGAGGTGAA TATCTGCCTG
AATGGGCAAT CCGTTGGCCG TGGCAGTTTA CTCCGGTGCG ATGAAAAACT GGTGGTCAGA
ATTGCACAAT GGGGATTACA AAACGGCGAA AATATCATGG AATGA
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| Protein sequence | MALTEIDGEG VYLPLHYGGQ ECGLWLSQSC WQHWLNTTLA TDNPQLLAAE LVIAMANWAV
TPLLALFTDL VVLAESPQKR SLPKQWAVTV AFELEGQPII GVLLDWPQAA LADTLSHWPC
EAVTAPDLLW QSGLVAGWCH LSLRQLQQLR PGEGLRLSMA AELDKEACWL WHHASPQIYI
KLEGGNRMTI QQINEASDPL ACGSRAESPP LAAVQLEDLP QTLVMEIGRL TLPLGEIKQL
AVGQTLACQT HCYGEVNICL NGQSVGRGSL LRCDEKLVVR IAQWGLQNGE NIME
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