Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2870 |
Symbol | |
ID | 5801342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3013017 |
End bp | 3013625 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641340721 |
Product | fimbrial protein |
Protein accession | YP_001607251 |
Protein GI | 162418895 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTCGT CGCTAAAAAA TAAGGTTGCA CAAAAACCTA TCGCGTTACT TCTTTTGCTG ACTACGGTTT TTATTGCCCA GTCACAACCC GCACAAGCCG CCAGTTCGTG TGCGGGAACG GCGGATTGTC ATATTCAGGT TTCATTTGGC GGTGAGTATG TAGAGGATAC CTGTGAAGTC AGTATTAATG GCGCTTCATC TGCCGAGTCA GTGTCTTTAC CGACGCTATC GACAAGTAAA TTAAATATTG ATGGTGCAGA AGCAGGTAAC CAGGCGTTTC AAATTGCATT GAAGCTATGT CCAGCAAATA GGTCTGTTGA TTTACGGTTT ACTGCGGCGG ATTCGTCCAG AAATCCAGAT GTGATAACAG GCAATTTACA AAATGAGCTG GCTGATGATT ACAGCAGAAA TGTACAAGTA AGATTAAGTA AAGCTACAGG GCAACAAATG TTCGTTGGTA GAGAAAATAG TGTTCAGGAA TATGTGATTC CTGCTACAGG TGAAGACATC ACTCATTATT TTCTAGCGGG TTATTATGCA AAAGGAACTA ATGCGGTAAC CCCTGGGCAG GTCAAAGCGA CTGCTGGTAT TGAATTGGTT TACAAATAA
|
Protein sequence | MSSSLKNKVA QKPIALLLLL TTVFIAQSQP AQAASSCAGT ADCHIQVSFG GEYVEDTCEV SINGASSAES VSLPTLSTSK LNIDGAEAGN QAFQIALKLC PANRSVDLRF TAADSSRNPD VITGNLQNEL ADDYSRNVQV RLSKATGQQM FVGRENSVQE YVIPATGEDI THYFLAGYYA KGTNAVTPGQ VKATAGIELV YK
|
| |