| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1938 |
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| Symbol | |
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| ID | 5800408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 2011379 |
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| End bp | 2012215 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641339862 |
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| Product | SciP protein |
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| Protein accession | YP_001606412 |
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| Protein GI | 162419405 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1360] Flagellar motor protein |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0552232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.859509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCCGTT GGTGGAGATA TAAGTGGATC ACTTTTCATC CGTCGTTGAC ATATGCGGAT
GGTTTAGAGG TTTTGCTGCG CATTTTAGGG CTCGGTTTTG AGGGGCGCTA CAGCATTATC
GAAGATGGTG ATCGGCAATT AACTAAAATA CGCCAAGGGT TGCTGACGCT GCTCCAAAGT
ACCCGAGACA CGATCCCACC GGCACTTTCT CCGCATGGGT TGATCGCACA TCAAAACAGA
AGACGGCGGG GCATTTTTGT TCCGGTGCGC GTATCCATGC TGTTGTGTGG TTTCCTCATT
GTCGCGACCT TTATTGGATG TAAATACTTT CTCTCGGTAC CGGAAAGTGA CTTGCTAAAA
AGAATGGGAG CATTGCAACG TGTGGTTGTG ACGCCACCCG TTGCCGCACC AAAACTTCGA
CTGTCTATTT TATTAAAAGA TGAGATAGCG AAGCAGTTAG TCAGTGTTGA TGAAACGAGC
AACAACAGCA AAGTCATCTT TAAAGGCGAC TCTATGTTTA TGGTCGGCTC GGATAACGTC
AGACCTGAAA TGATTGACGT AATTAAACGC GTCGCGCAGG AAGTGCATCG CGTTAAAGGG
GCAATCCTCA TCGTCGGGCA TACAGACTCT ATGCCGATTA ATAAACCCGG CTTCCCTAAT
AACCAGGTAC TTTCCGAAAA ACGCGCGGCC AATGTTGCAC GCTATATGGA GCAGGCCGGT
ATTCCAACCG ACAAAATTCG GTTTGAGGGC AAGGGGGAAA CGCAACCGGT TAGCAGCAAT
GACGATGCGA CAGGACGTTC GCAAAACCGC CGCGTAGAAA TTTTTGTTAA TTATTGA
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| Protein sequence | MGRWWRYKWI TFHPSLTYAD GLEVLLRILG LGFEGRYSII EDGDRQLTKI RQGLLTLLQS
TRDTIPPALS PHGLIAHQNR RRRGIFVPVR VSMLLCGFLI VATFIGCKYF LSVPESDLLK
RMGALQRVVV TPPVAAPKLR LSILLKDEIA KQLVSVDETS NNSKVIFKGD SMFMVGSDNV
RPEMIDVIKR VAQEVHRVKG AILIVGHTDS MPINKPGFPN NQVLSEKRAA NVARYMEQAG
IPTDKIRFEG KGETQPVSSN DDATGRSQNR RVEIFVNY
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