Gene YpAngola_A1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1906 
Symbol 
ID5800377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1979281 
End bp1979616 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content49% 
IMG OID641339832 
Productdeoxyribonuclease TatD 
Protein accessionYP_001606387 
Protein GI162418929 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00160909 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATCACT TTTCATCCGT CGTTGACAGT GATGAGTTAG ATGCCTGTTT AGCATTGGGT 
TTATCTATAG GTATCACGGG TTGGGTTTGC GATGAGCGTC GTGGCCTTGA TCTTAGAGCT
TTGCTCCCGC GTATTCCTGT TCAGCAGCTA TTGTTGGAAA CTGATGCTCC CTATTTATTG
CCAAGGGATT TGAATCCTAA ACCTGCATCA CGTCGCAATG AACCCTGTTT TCTGCCCCAT
ATCGTCCAGC AGGTTGCAGC CTGGCGACAA GAAGACCCTA ATTGGCTAGG ACAGAAAACT
GATGAAAACG CCCGCCGGGT TTTCCGGCTG GTTTGA
 
Protein sequence
MDHFSSVVDS DELDACLALG LSIGITGWVC DERRGLDLRA LLPRIPVQQL LLETDAPYLL 
PRDLNPKPAS RRNEPCFLPH IVQQVAAWRQ EDPNWLGQKT DENARRVFRL V