Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1681 |
Symbol | agaN |
ID | 5800152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1733307 |
End bp | 1735433 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641339621 |
Product | alpha-galactosidase |
Protein accession | YP_001606177 |
Protein GI | 162419922 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0310145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0290981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACTA CCTTTGTCAG ATTATCCAGC CGTTCTTCTG ACATGATCGT GCGCTGCTCT CCCTACGCAG AAATTGTTTA CTGGGGTAAG CCTCTGCTTG ATTACTCGCC TGCGATGATG GAAGCCTTAA ACCGCCCGGT CGCTAACAGC CGCCTGGACA GCGATATACC GTTGACGCTC TGCCCTGAAA ATGGCCGAGG GCTGTTCAGC GTGCCCGGTA TGGAGGGAAA CCGTGATGGC GAAGATTGGT CTCCCATTTT CACCAGCCAG AGCCATACAC TTGAAAACAA TTTATTAACG ATTATTAGCG AAGATACGAG CGCGGGCTTG CGGCTGGTGA GTGAGTTGCA GATGTGCCCA GACAGTGGCG TGATAAAAAC CCGCAATACG CTGACCAATA TTAAAGCCGG ATGCTACCGA ATCGATCGGT TGGCCGTGAC CTTGCCTTTT CCGGAACGTG CCAATGAAAT CATGGCCTTC AATGGCCGTT GGATTAAAGA GTTCCAGCGC CACTCACTTA AACTCGATCA TGGCGGTTAT ATTCAGGAAA ATCGGCGCGG CAGAACCTCA CATGAATATT TTCCCGGCAT GGTAGTAGGG AAAGCAGGCT TCAGTGAGCA ACAGGGCGAG GTCTGGGGCT TGCATCTGGC CTGGAGTGGA AACCATCGTT TACGCGCTGA CTGTAAAAGT GATGGCCGCC GTCAGGTGCA GGCCGAAGCC CTCTATTTTT CCGGTGAAAT CGTTCTGGAA CACTTGCAAA GTGTCAGTAC CCCGTGGGTC TACGCGACCT ATTCCGCTAC CGGGTTGAAC GGTATGAGCC ACAGTTTTCA TCACTATGTG CGCCAGAATA TCGTGCCATC ACTGGCAGAA AAACCGCGCC CGGTGCACCT CAATACTTGG GAAGGCATCT ATTTTAAGCA TGACCCAGAC TACATTATTC AGATGGTGAA AAACGCGGCC AAAATTGGTG TGGAGCGCTT TATCATTGAT GATGGCTGGT TCAAAGGACG CAACAACGAT TTAAGTTCAC TGGGCGATTG GTATATTGAT GCCGAAAAAT ACCCACAGGG GCTGAACCCC ATTATTGAAG CAGTGAATGA ATACGGTATG GAGTTTGGTA TCTGGGTGGA ACCTGAAATG ATCAATCAGG ATTCTGATTT ATACCGTAAT CATCCTGACT GGGTGCTGAA ACTTGACGGC TACCCGCTAC TGAAAGGACG CGACCAACTG TTGCTCGATT TGTCGAACCC GGCCGTTTTC GACTACCTGC TAGAACGCTT GAGCTGGTTG TTGGGCGAAC ACAAAGTTGA CTATGTTAAA TGGGATTTCA ACCGCGAGAT GGTCCAGCCC GGTCACCGCG GCCACCCTTC GTTGGTACAA CAGACCGAGC AACTGTATCG CTTATTCGAC CAACTCAACC TGCATTTCCC ACATATTGAA TTTGAATCCT GCGCGTCAGG CGGGGGGCGT ATTGATTATG AAATTCTGCA ACGCTGCCAC CGTTTCTGGC CATCAGACAG CAACGACGCT CTTGATCGCC AGCAAATTCA GCGAGGGATG AGCTACTTCT TCCCTCCAGA AGTTATGGGC GCGCATATTG GCGGTACTCC GTGCCATACC ACCGCCAGAA TGCACTCTAT TAATTTTCGG GGGCTGACAG CGCTGTTCGG CCATATGGGG GTCGAGCTTG ATCCGGTGAG TGAATCTCCT GCCGAGCAAC AGGCTTTTGC CCGTTATATT GCGCTACATA AACAACTGCG GCCGCTGTTA CATAGCGGAA ACACGATCCG GCTCGACCAT CCGGATAAAA CAACATTAAT TAATGCCGTT ATCGCACACG ACCAGCAGCA AGCTGTCGTC CTGATCAGCC AGCTAGCACT ACCGGAATAT GCCTTATGTG GCAACGTATT GATTCCTGGT CTTAACCCAT CCACACACTA TCAGATCGAG GTTCTGGACA TGCCTGACAG CATGCACAAA CCACGAAATA ACACCATGAA GCGCTATCCA GCCTGGTTGA AAAGCCCGCT CATCGTCAGT GGCGATTGGC TAGAGAAAGC AGGAATTGCC CTTCCCATCC TCAATCCTGA ATCGGCTATC CTGATACAGC TTTCAGCCGT AAATTAA
|
Protein sequence | MNTTFVRLSS RSSDMIVRCS PYAEIVYWGK PLLDYSPAMM EALNRPVANS RLDSDIPLTL CPENGRGLFS VPGMEGNRDG EDWSPIFTSQ SHTLENNLLT IISEDTSAGL RLVSELQMCP DSGVIKTRNT LTNIKAGCYR IDRLAVTLPF PERANEIMAF NGRWIKEFQR HSLKLDHGGY IQENRRGRTS HEYFPGMVVG KAGFSEQQGE VWGLHLAWSG NHRLRADCKS DGRRQVQAEA LYFSGEIVLE HLQSVSTPWV YATYSATGLN GMSHSFHHYV RQNIVPSLAE KPRPVHLNTW EGIYFKHDPD YIIQMVKNAA KIGVERFIID DGWFKGRNND LSSLGDWYID AEKYPQGLNP IIEAVNEYGM EFGIWVEPEM INQDSDLYRN HPDWVLKLDG YPLLKGRDQL LLDLSNPAVF DYLLERLSWL LGEHKVDYVK WDFNREMVQP GHRGHPSLVQ QTEQLYRLFD QLNLHFPHIE FESCASGGGR IDYEILQRCH RFWPSDSNDA LDRQQIQRGM SYFFPPEVMG AHIGGTPCHT TARMHSINFR GLTALFGHMG VELDPVSESP AEQQAFARYI ALHKQLRPLL HSGNTIRLDH PDKTTLINAV IAHDQQQAVV LISQLALPEY ALCGNVLIPG LNPSTHYQIE VLDMPDSMHK PRNNTMKRYP AWLKSPLIVS GDWLEKAGIA LPILNPESAI LIQLSAVN
|
| |