| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1397 |
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| Symbol | tolB |
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| ID | 5799864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 1455052 |
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| End bp | 1456344 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641339355 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001605922 |
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| Protein GI | 162418362 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000187657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG CATTTCGAGT AGCGCTAGGC TTTTTAGTTT TATGGGCTTC GGTATTACAT
GCAGAAGTTC GGATTGAGAT TACCCAAGGG GTAGACTCAG CACGTCCGAT TGGGGTTGTT
CCGTTCAAAT GGATGGGGCC GGGCACACCA CCTGAAGAAA TTGGCGCCAT CGTAGGTGCA
GATTTACGTA ACAGCGGCAA ATTTAACCCA ATTGATGCTG CTCGTATGCC ACAACAGCCT
TCCACAGCCG CTGAAGTAAC CCCTGCTGCT TGGACTGCTT TGGGGATCGA TGCCGTTGTT
GTTGGCCAAG TTCAACCAAG TGCTGACGGT AGCTATGTGG TCTCTTACCA GCTAGTGGAT
ACTTCTGGCT CTGCTGGCAG CATTTTGGCG CAAAATCAGT ATAAAGTGAC TAAACAATGG
TTACGTTATT CAGCGCACAC CGTCAGTGAT GAAGTATTTG AAAAACTCAC TGGGATTAAA
GGCGCTTTCC GTACTCGCAT TGCTTATGTT GTGAAAACTA ACGGTGGTAA ATTCCCACAT
GAATTACGGG TTTCTGATTA CGATGGCTAC AACCAGTTTG TCGTCCACCG CTCTCCTGAA
CCTCTGATGT CACCCGCTTG GTCACCAGAT GGTAGCAAAA TTGCCTATGT GACTTTTGAA
AGTGGCAAAT CAGCATTGGT TATTCAGACG CTGGCAAATG GTGCGATTAG GCAAGTGGCC
TCATTCCCAC GTCATAACGG TGCACCCGCG TTCTCACCTG ATGGCACCAA GCTGGCCTTC
GCGTTATCTA AAAGCGGTAG CCTGAACTTG TATGTTATGG ACTTGGCTTC AGGTCAAATC
AGCCAAGTGA CGGATGGTCG TAGCAATAAT ACTGAACCAA GCTGGTTCCC GGATAGCCAA
AATCTGGCTT ATACCTCGGA TCAGGGGGGG CGTCCACAAG TTTATAAAGT GAATATTAAT
GGCGGTGTGC CACAGCGAAT CACGTGGGAA GGTTCTCAGA ACCAGAACGC AGACGTGAGC
CCTGATGGTA AGTTCCTGGT ATTGGTTAGT TCCAATGGTG GGGCACAACA CATCGCCAAA
CAGGATCTGG AAACGGGAGC CGTTCAAGTA TTAACGGACA CGTTACTGGA TGAAACGCCT
AGTATCGCGC CTAACGGCAC CATGGTTATC TATAGCTCGA CACAAGGGCT GGGTTCCGTG
TTACAGCTGG TCTCGACTGA TGGGCGTTTC AAAGCGCGTC TTCCGGCAAC TGATGGACAG
GTCAAATTTC CTGCCTGGTC GCCGTATCTG TGA
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| Protein sequence | MKQAFRVALG FLVLWASVLH AEVRIEITQG VDSARPIGVV PFKWMGPGTP PEEIGAIVGA
DLRNSGKFNP IDAARMPQQP STAAEVTPAA WTALGIDAVV VGQVQPSADG SYVVSYQLVD
TSGSAGSILA QNQYKVTKQW LRYSAHTVSD EVFEKLTGIK GAFRTRIAYV VKTNGGKFPH
ELRVSDYDGY NQFVVHRSPE PLMSPAWSPD GSKIAYVTFE SGKSALVIQT LANGAIRQVA
SFPRHNGAPA FSPDGTKLAF ALSKSGSLNL YVMDLASGQI SQVTDGRSNN TEPSWFPDSQ
NLAYTSDQGG RPQVYKVNIN GGVPQRITWE GSQNQNADVS PDGKFLVLVS SNGGAQHIAK
QDLETGAVQV LTDTLLDETP SIAPNGTMVI YSSTQGLGSV LQLVSTDGRF KARLPATDGQ
VKFPAWSPYL
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