| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1216 |
|---|
| Symbol | |
|---|
| ID | 5799681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1264332 |
|---|
| End bp | 1264730 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641339187 |
|---|
| Product | carboxymuconolactone decarboxylase family protein |
|---|
| Protein accession | YP_001605757 |
|---|
| Protein GI | 162418386 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0658576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTAG CTCAAGATCG TTTTGAACGG GGTTTTCACA ACCGAAAAGT AGTACTGGGC
GCGGAACATG TTGAAACATC ATGGGGTAAT TCGGATGAAT TCAACCGACC GGTGCAAAAA
CTGATCACTG AATATTGCTG GGGAGAGGTC TGGGGGGATC CGGCACTCAC TTTTAAAACT
CGCAGTATGC TGAATATTGG CATTCTCACG GCGATGGGCC AGCATCATGA GCTTTCTTTA
CACGTTAAAG GCGCGCTGAG AAATGGTGTC ACACGCGAGG AGATACGCGC GGTGTTGCTA
CAAACCGTGG TGTATTGCGG TGCGCCAGTC GCGCTGGCGG CGTTTCGTAT TGCCAGTGCC
GCAATCAAAG CGTATGACGA TGAGATTGCT GACAGTTAG
|
|---|
| Protein sequence | MMVAQDRFER GFHNRKVVLG AEHVETSWGN SDEFNRPVQK LITEYCWGEV WGDPALTFKT
RSMLNIGILT AMGQHHELSL HVKGALRNGV TREEIRAVLL QTVVYCGAPV ALAAFRIASA
AIKAYDDEIA DS
|
|---|
| |