Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1162 |
Symbol | treR |
ID | 5799627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1198533 |
End bp | 1199486 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641339136 |
Product | trehalose repressor |
Protein accession | YP_001605706 |
Protein GI | 162420317 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.949155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACC GTTTGACCAT TAAAGATATT GCCCGCATGA GTGGTGTTGG AAAATCCACA GTTTCACGGG TATTAAATAA TGAAGGCAGC GTCAGCCCAC AGACCCGTGA ACGGGTCGAG GCGGTGATCC GCCAGCACGG TTTTACCCCC TCCAAATCGG CCCGAGCCAT GCGTGGGCAA AGCGACAAAG TTGTTGGCAT CATTGTCTCT CGTCTCGATT CGCCATCCGA GAACCAGGCA GTACGTACTA TGTTACCGCT GTTCTATCAA CAAGGTTACG ACCCGATCCT GATGGAGAGC CAATTTGATA CCACATTGGT TAGCGAGCAT TTACATATTC TGCAACAACG CCATGTTGAT GGCGTGATCC TGTTCGGTTT CAGCGGATTA ACTGCAGAAA TGCTGGCACC GTGGCAGGAA AAAATGGTGG TGCTGGCGCG CGAGTACCGT GGTTTTTCTT CTGTCTGCTA TGACGATGAA GGTGCCATAT ACCTCTTGAT GGACAAATTA CGCCAAGCCG GGCACCGCCA TATCAGTTAT ATCGGCGTAC AATCTTCCGA TGCAACCACC GGTATGCGCC GCTATCAAGC CTATCTCGAT TACAGTCAAC AGCATGGCCT GACACCCATG GTGGCGCTGG GGGAGTTGAG CTATCAGAGT GGCTTTCAGC TCGCTCCTCA GGTGATAACC CCACAAACCT CGGCATTGGT TTGTGCCTCT GACACTATCG CCATGGGCGT CAGTAAATAC TTGCAACAGC AGGAGCGGGA GCAGCCCCCC ATTCAGGTAT GCGGTATTGG TAATACACCG CTGTTACACT TTTTGTTTCC CGATACCTTA ACCATTGAGC TGGGTTATGG CCGTGCAGGT GTGAAAGCCG CGCAGCAGTT ACTGGACCAA CTGAGTAATA GCCAACCTAT TCAGCAAATT ATTATTCCGG GCCAACTCGT CTGA
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Protein sequence | MQNRLTIKDI ARMSGVGKST VSRVLNNEGS VSPQTRERVE AVIRQHGFTP SKSARAMRGQ SDKVVGIIVS RLDSPSENQA VRTMLPLFYQ QGYDPILMES QFDTTLVSEH LHILQQRHVD GVILFGFSGL TAEMLAPWQE KMVVLAREYR GFSSVCYDDE GAIYLLMDKL RQAGHRHISY IGVQSSDATT GMRRYQAYLD YSQQHGLTPM VALGELSYQS GFQLAPQVIT PQTSALVCAS DTIAMGVSKY LQQQEREQPP IQVCGIGNTP LLHFLFPDTL TIELGYGRAG VKAAQQLLDQ LSNSQPIQQI IIPGQLV
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