Gene YpAngola_A0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0544 
Symbol 
ID5799007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp564799 
End bp565515 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content51% 
IMG OID641338549 
Productflavin mononucleotide phosphatase 
Protein accessionYP_001605137 
Protein GI162419771 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTT ATCGTCCACT TGAGCGTATT TCCGCTATTA CCTTCGATTT GGATGACACG 
TTGTACGACA ATCGGCCAGT GATCGCGCGG ACTGAACAGC AGTCTGTGGC TTTTTTACAA
CAGTATCATC CCAATTTAGC CCTATTACAG CCAGCGGATT TCCAGCGCTT ACGTGCTGAA
TTATTGGCAC AAGATCCCGG TATCTACCAC GATGTCACGC AATGGCGCTG GCAGGCGATT
GAACTGGGCT TGATGCGCCA TGGCCTGAGT AAGGCAGAGG CGCAAGCGGG AGCGGATGCG
GCGATGGCAA ACTTTGCGCT ATGGCGCAGC CGTATTGATG TGCCGCAAGC CACACACGAT
ACACTGAGCG CATTAGCGGA GCATTACCCA CTGGTGGCCA TCACTAACGG CAATGCTGAT
CCTAAAGCTT GCGGGTTGGA TCGCTATTTT CAATTTGTCT TGCGCTCTGG GCCTCATGGC
CGCGCCAAGC CATTCCGCGA TATGTATCAT AAAGCGGCGA ACCATTTGGA TATTCCGTTA
AAACATATTC TGCATGTTGG CGATGACCTA ACGACGGATG TTGCCGGCTC ACTGCGCTGT
GGTATGCAAG CCTGTTGGAT TAACGATAGG CAACAAAACC TGATGACTGC CCGTGATAGC
CGTTTACTGC CACATATTGA AATTTCCCAG TTGGCATCCC TGACAGCATT GCTATAA
 
Protein sequence
MHFYRPLERI SAITFDLDDT LYDNRPVIAR TEQQSVAFLQ QYHPNLALLQ PADFQRLRAE 
LLAQDPGIYH DVTQWRWQAI ELGLMRHGLS KAEAQAGADA AMANFALWRS RIDVPQATHD
TLSALAEHYP LVAITNGNAD PKACGLDRYF QFVLRSGPHG RAKPFRDMYH KAANHLDIPL
KHILHVGDDL TTDVAGSLRC GMQACWINDR QQNLMTARDS RLLPHIEISQ LASLTALL