Gene YpAngola_A0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0520 
Symbol 
ID5798983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp544282 
End bp545538 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content50% 
IMG OID641338525 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_001605117 
Protein GI162420354 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGG CAAAAGCATC GATTTGGACT GCCTGCTCTA CGCTAATCAA GATTGGCGTA 
GGGCTATTGG TGGTTAAACT GCTGGCGGTC ACCTTTGGCC CCAGCGGTGT GGGGCAGGCG
GGTAATTTCC GTCAGCTAAT TATCGTGTTA GGTGTGCTGT CTGGCGCGGG TATCTTTAAC
GGTATTACTA AATATGTTGC TGAATATCAT CAGCAACCTG AACGTTTACG GGCCATGCTG
GGCACCTCGT CCACTATTGT TCTGGGGTTC TCAACCCTAT TGGCCTTGGT TTTTCTGCTG
GCCGCGAAAC CTGTCAGCAT CGCGTTATTT GGCCATGCGG ATTACCAGAA TGTGGTGCGC
GCGATAGCAT TTATCCAGAT GGGAATTGCC TACGGCAACT TGTTTCTGGC GATCCTCAAA
GGTTATCGCG ATGCCATGGG CAATGCGCTA GCGATCATTG GCGGTAGCCT GATTGGGGTC
GTAGCATATT ATATTTGTTT TCAGATCGGG GGCTATTCGG GTGCGTTAGT TGGCTTAGGA
TTAGTCCCGG CGTTGGTTGT GCTCCCCGCT GCGGCGATGC TGTACCGCCG CCGTACGATC
CCGCTGCGCT ACCTTAAACC GCATTGGGAT AAAGCGCTGG CCAGCCATTT GGGCAAATTC
ACACTGATGG CGCTGATTAC GTCAGTGACC TTGCCTGTGG CCTATGTAAT GATGCGTCAC
TTACTGGCGA ATAACTATGG TTGGGATGCC GTCGGGATCT GGCAAGGGGT CAGCAGCATT
TCAGATGCTT ACCTACAATT TATTACGGCC TCATTTACCG TCTATCTGTT GCCAACACTG
TCTCGGCTGA AGGATAAAGG GGCGATTTCC CGTGAAATCT TCCGTTCACT AAAGTTTGTG
TTGCCTGCGG TGGCGGCAGC CAGTCTGACG GTTTGGTTAT TACGTGATTT TGCTATCTGG
TTGTTGTTTT CTCACCAGTT TACTGCGATG CGTGATCTTT TTGCCTGGCA GTTGGTGGGC
GATGTATTAA AAGTGGGGTC TTATGTGTTT GGCTATCTGG TCATTGCTAA AGCATCGCTA
CGTTTTTATA TTTTGGCGGA AGTCAGCCAG TTCTTACTGT TGACCGGGTT TGCCTACTGG
TTAATTCCAA TGAATGGCTC TCTTGGTGCG GCACAGGCGT ATATGGCAAC GTATATCGTC
TATTTTGCGC TCTGTAGCTG CGCATTCCTT GTGTATCGTA GACACTCAGC ACCGTAA
 
Protein sequence
MSLAKASIWT ACSTLIKIGV GLLVVKLLAV TFGPSGVGQA GNFRQLIIVL GVLSGAGIFN 
GITKYVAEYH QQPERLRAML GTSSTIVLGF STLLALVFLL AAKPVSIALF GHADYQNVVR
AIAFIQMGIA YGNLFLAILK GYRDAMGNAL AIIGGSLIGV VAYYICFQIG GYSGALVGLG
LVPALVVLPA AAMLYRRRTI PLRYLKPHWD KALASHLGKF TLMALITSVT LPVAYVMMRH
LLANNYGWDA VGIWQGVSSI SDAYLQFITA SFTVYLLPTL SRLKDKGAIS REIFRSLKFV
LPAVAAASLT VWLLRDFAIW LLFSHQFTAM RDLFAWQLVG DVLKVGSYVF GYLVIAKASL
RFYILAEVSQ FLLLTGFAYW LIPMNGSLGA AQAYMATYIV YFALCSCAFL VYRRHSAP