Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0520 |
Symbol | |
ID | 5798983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 544282 |
End bp | 545538 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641338525 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001605117 |
Protein GI | 162420354 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTGG CAAAAGCATC GATTTGGACT GCCTGCTCTA CGCTAATCAA GATTGGCGTA GGGCTATTGG TGGTTAAACT GCTGGCGGTC ACCTTTGGCC CCAGCGGTGT GGGGCAGGCG GGTAATTTCC GTCAGCTAAT TATCGTGTTA GGTGTGCTGT CTGGCGCGGG TATCTTTAAC GGTATTACTA AATATGTTGC TGAATATCAT CAGCAACCTG AACGTTTACG GGCCATGCTG GGCACCTCGT CCACTATTGT TCTGGGGTTC TCAACCCTAT TGGCCTTGGT TTTTCTGCTG GCCGCGAAAC CTGTCAGCAT CGCGTTATTT GGCCATGCGG ATTACCAGAA TGTGGTGCGC GCGATAGCAT TTATCCAGAT GGGAATTGCC TACGGCAACT TGTTTCTGGC GATCCTCAAA GGTTATCGCG ATGCCATGGG CAATGCGCTA GCGATCATTG GCGGTAGCCT GATTGGGGTC GTAGCATATT ATATTTGTTT TCAGATCGGG GGCTATTCGG GTGCGTTAGT TGGCTTAGGA TTAGTCCCGG CGTTGGTTGT GCTCCCCGCT GCGGCGATGC TGTACCGCCG CCGTACGATC CCGCTGCGCT ACCTTAAACC GCATTGGGAT AAAGCGCTGG CCAGCCATTT GGGCAAATTC ACACTGATGG CGCTGATTAC GTCAGTGACC TTGCCTGTGG CCTATGTAAT GATGCGTCAC TTACTGGCGA ATAACTATGG TTGGGATGCC GTCGGGATCT GGCAAGGGGT CAGCAGCATT TCAGATGCTT ACCTACAATT TATTACGGCC TCATTTACCG TCTATCTGTT GCCAACACTG TCTCGGCTGA AGGATAAAGG GGCGATTTCC CGTGAAATCT TCCGTTCACT AAAGTTTGTG TTGCCTGCGG TGGCGGCAGC CAGTCTGACG GTTTGGTTAT TACGTGATTT TGCTATCTGG TTGTTGTTTT CTCACCAGTT TACTGCGATG CGTGATCTTT TTGCCTGGCA GTTGGTGGGC GATGTATTAA AAGTGGGGTC TTATGTGTTT GGCTATCTGG TCATTGCTAA AGCATCGCTA CGTTTTTATA TTTTGGCGGA AGTCAGCCAG TTCTTACTGT TGACCGGGTT TGCCTACTGG TTAATTCCAA TGAATGGCTC TCTTGGTGCG GCACAGGCGT ATATGGCAAC GTATATCGTC TATTTTGCGC TCTGTAGCTG CGCATTCCTT GTGTATCGTA GACACTCAGC ACCGTAA
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Protein sequence | MSLAKASIWT ACSTLIKIGV GLLVVKLLAV TFGPSGVGQA GNFRQLIIVL GVLSGAGIFN GITKYVAEYH QQPERLRAML GTSSTIVLGF STLLALVFLL AAKPVSIALF GHADYQNVVR AIAFIQMGIA YGNLFLAILK GYRDAMGNAL AIIGGSLIGV VAYYICFQIG GYSGALVGLG LVPALVVLPA AAMLYRRRTI PLRYLKPHWD KALASHLGKF TLMALITSVT LPVAYVMMRH LLANNYGWDA VGIWQGVSSI SDAYLQFITA SFTVYLLPTL SRLKDKGAIS REIFRSLKFV LPAVAAASLT VWLLRDFAIW LLFSHQFTAM RDLFAWQLVG DVLKVGSYVF GYLVIAKASL RFYILAEVSQ FLLLTGFAYW LIPMNGSLGA AQAYMATYIV YFALCSCAFL VYRRHSAP
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