Gene YpAngola_A0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0183 
SymbolytbI 
ID5798646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp193174 
End bp193701 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content41% 
IMG OID641338203 
ProductN-acylhomoserine lactone synthase YtbI 
Protein accessionYP_001604809 
Protein GI162418121 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG3916] N-acyl-L-homoserine lactone synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0180575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000220703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTTG ATGAATATGA TAATTCGGAT ACACGCTATC TCCTTGGTAT TTACCAAGGT 
CAACTAATCT GCAGTGTGCG TTTTATAGAA CTTCACCTGC CTAATATGAT CACTCATACC
TTCAATGCAC TCTTCGATGA CGTGGCATTA CCTAAGAGGG GCTATATAGA ATCGAGCCGT
TTCTTCGTTG ATAAAACCCG TGCCAAGTTG CTTTTTGGTA ACCATTACCC CATAAGCTAC
TTATTCTTTT TATCGATTAT TAATTACTCC CGACATAATG GCTACACAGG TATTTATACT
ATCGTCAGCC GAGCAATGTT GACCATCCTT AAACGATCAG GCTGGCAGGT TGAGGTGATT
AAAGAAGCAC ATATTACCGA AAAAGAAAGG ATATACTTAC TGCATCTCCC GATAGATCGG
GACAATCAAG CACGGCTGCT TTTACAGGTT AATCAGCGTT TGCAGGATCC ATGTTCAGTA
TTAAGTACAT GGCCTATATC GTTGCCCGTT ATGCCAGAAT CGGCTTAA
 
Protein sequence
MEFDEYDNSD TRYLLGIYQG QLICSVRFIE LHLPNMITHT FNALFDDVAL PKRGYIESSR 
FFVDKTRAKL LFGNHYPISY LFFLSIINYS RHNGYTGIYT IVSRAMLTIL KRSGWQVEVI
KEAHITEKER IYLLHLPIDR DNQARLLLQV NQRLQDPCSV LSTWPISLPV MPESA