Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0183 |
Symbol | ytbI |
ID | 5798646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 193174 |
End bp | 193701 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641338203 |
Product | N-acylhomoserine lactone synthase YtbI |
Protein accession | YP_001604809 |
Protein GI | 162418121 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0180575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000000220703 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGTTTG ATGAATATGA TAATTCGGAT ACACGCTATC TCCTTGGTAT TTACCAAGGT CAACTAATCT GCAGTGTGCG TTTTATAGAA CTTCACCTGC CTAATATGAT CACTCATACC TTCAATGCAC TCTTCGATGA CGTGGCATTA CCTAAGAGGG GCTATATAGA ATCGAGCCGT TTCTTCGTTG ATAAAACCCG TGCCAAGTTG CTTTTTGGTA ACCATTACCC CATAAGCTAC TTATTCTTTT TATCGATTAT TAATTACTCC CGACATAATG GCTACACAGG TATTTATACT ATCGTCAGCC GAGCAATGTT GACCATCCTT AAACGATCAG GCTGGCAGGT TGAGGTGATT AAAGAAGCAC ATATTACCGA AAAAGAAAGG ATATACTTAC TGCATCTCCC GATAGATCGG GACAATCAAG CACGGCTGCT TTTACAGGTT AATCAGCGTT TGCAGGATCC ATGTTCAGTA TTAAGTACAT GGCCTATATC GTTGCCCGTT ATGCCAGAAT CGGCTTAA
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Protein sequence | MEFDEYDNSD TRYLLGIYQG QLICSVRFIE LHLPNMITHT FNALFDDVAL PKRGYIESSR FFVDKTRAKL LFGNHYPISY LFFLSIINYS RHNGYTGIYT IVSRAMLTIL KRSGWQVEVI KEAHITEKER IYLLHLPIDR DNQARLLLQV NQRLQDPCSV LSTWPISLPV MPESA
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