Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0164 |
Symbol | |
ID | 5798628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 171226 |
End bp | 171861 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641338186 |
Product | Rhs element Vgr protein |
Protein accession | YP_001604792 |
Protein GI | 162421875 |
COG category | [S] Function unknown |
COG ID | [COG4253] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00000065374 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAACCGG CTATCAGCCT GTTGAAAAGT GCGCAGGAAC AGATGGAGGC CATCTCCGCA GATGCACAAA CCGCCACCGC CAGTCCGGCC GACCTGCAGG CACAAATCAG TCTGTTGCAG CAAAACCTCA CTGAACTGAA ACAAGCTGTC CTGTTACTGA GTGCGCCAAA GGGGATCGCG TTGAGCAGCG GGGAGCATCT GCAAATGAGT GCCAGCGATA ACCTGATTGC CACCGCAGGT AAAAATGCCG ACGTCAGCGT CGCGAAAAAC TTCTTTATCG GCGTAGGCAA TACCCTAAGT ATCTTCGTCA GAAAGCTGGG GATGAAACTA ATAGCCAATC AGGGGTCGAT AACAGTCCAG GCGCAGAATG ATCTAATGGA GTTATTGGCG CGTAAAGCGA TCACGATCAC CAGCACCGAG GATGAGATAA AAATCACCGT CAAGAAGAGG ATCACGCTGA ATGCGGGAGG CAGTTATATC ACGCTGGATG AGAATCGGAT CGAGTCAGGA ACGGCGGGGG AATATTTGAC CAAAGCAGGG TATTACGGGC GGTTAGATAA GGCCAAGCTC CCAACTGAAT TTCCAGCCTT AGCCGCTAAA GCTAAACCAC CCACTCAGAA GTATCCATTT TCTTAA
|
Protein sequence | MQPAISLLKS AQEQMEAISA DAQTATASPA DLQAQISLLQ QNLTELKQAV LLLSAPKGIA LSSGEHLQMS ASDNLIATAG KNADVSVAKN FFIGVGNTLS IFVRKLGMKL IANQGSITVQ AQNDLMELLA RKAITITSTE DEIKITVKKR ITLNAGGSYI TLDENRIESG TAGEYLTKAG YYGRLDKAKL PTEFPALAAK AKPPTQKYPF S
|
| |