Gene YpAngola_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_0109 
Symbol 
ID5798452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010158 
Strand
Start bp87911 
End bp90277 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content52% 
IMG OID641338002 
ProductcobT family protein 
Protein accessionYP_001604619 
Protein GI162417839 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.49872e-80 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.67705e-133 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCCAAAG CCATGACCAG AGCTGTGCTG AAAGAGGTAC AGGACTTCCG CGACTGCGTA 
AAACGAGTTG TAGCGATGCT TTCAGGCAAA CAGATACCTG TTGCAGAACG AGGCAATGAA
GCGTATGTCC GCTACAACCG GCGCGGCGAA CCAGTGCTGG TAAACATCCC ATCTATACCG
GACGATGCAT CACCAACCCT CATGAACGCA GTACGTGGTT TTCTCGACCA TGAAGTAGCC
CATATCCTCT TTACTGATCC GAAAGTCGCG ATGAAGATGC GCGAGAGAGG AAAGGCTCCG
TCTACCGGGC TTTGGAACGC GCTGGAAGAC GTTTTTATTG AACGCAGAAT GGGACAGGTA
TTCAACGGAA CCCGTCGTAA TTTGCTAGCC ACACAGAACC TGGTGATCGA CAAATACTTC
AAGGGCAAAG TGTCAGAGGC GGTTTCAATC TGCCACGGCA ACCAGCGTGA ATTGTTCCTG
AAATTCTTCC TTTGCCCGGT CGTCCGCGCC TGGGATGGCC AAAGCCCTTT CATCGACTTT
ATGGAAGAAC ACTGGCACCT CATCGATAAG CCTGTAGCCT TGCTCAAAGA GCATGGTATC
GACGTGGCCG TTCGCAATAT GTCGAACACA GAGGACTGCG TAAAGGTCGC AGCTGCTATC
GCCCAAATCA TGCAGGATAT GAAAGACAAG CCAGAGGGCA AATTACCTGA GCTTAAATCA
TCTGCCAAAA AGCCGTCTAA GAGCAAAGAC GAGTCCGAGG AAACACCAGA GTCAGGCGAC
GATCCGTCTC ATAGTGAATC TGCACCAAAG CGAACCAAAG GCGAAGACGA CGACAAGGAA
GAGCAAGAAG ATGATGCCTC AGAAGAGGAA GATTCTGGGG ATTCTGATTT GCCTGATTCA
TTAGATAAGG ACTTACCTAT ACATGATAAA GAAATTAGTG ATACAGAAAG TAAATATACA
GAAGCAGGCG AAGATGAGTC AGGAGACACC CCAGAATCCG ATGATGCCGG CATGGAATCA
GGTGATTCTG ACGACGAAGG TGGTAGTGAT GGCACTGGCG CTCCAACGCC TGGTGATGGC
ATTCGCGAAG ACGCCGATGA CTCCGATGGT TATGGCTCTG GCGCCGCTGG CGATGGGGAT
AGTGATAACG GCGAAGACTC CGATGCCGGT CGTGAGGAGT CCGAAGGAGA AGACGAAGGC
GAAGAGGACG TCGCCGATCA CACTGACGGC GAAGGCAAGG AAAATGAGGA TGCCGCGGAA
GCGCCTGAAG ACAGTGAGTC AGGCTTTGTT CCTGCGCCGG ATGAAATGAC TCTGGAGGAC
GCACTCAAGG CGCTCGACGA GATGGAAGAA GGAACAGACG AAATGACCGA AGACGCACTG
TCGGCCACCA TCAGCAAAGA GCTTATGAGC GCCTCACTTT CTGAGTATCG CCCATACGAT
CGTTCATACG ACTTTATCGG GTTGATTGAT GAGGCTGAAG AGCATGTAAA ACGCACCAGA
AAGACATTCG GCGCAATCCC AATGCACTCA CCTGTCGATC GCTACCGCAT GGTTCCGGAA
GGCAGAAAAC TCTTTGAACT GAAAATCGAA AAACATCTGT CTGCCGGCGT TTCTTCGACT
CTGGCCAAAG ACCTGGAGCG AGCTATCGCC AGCCGCAACC GAGTTCAGTT CATACCGGGT
CAGAGACGTG GGCGGATACA TGGCGCGAAC CTGTATCGTC TGGCAATGAA CGACGACCGC
GTGTTCCGCA AGAAAGAAGA CCACAGAGCG GTGAACGCGT GCGTCCAGCA GGTGATCGAC
TTGTCCGGCT CAATGGGCGG CAGGAAGATT CAACTGGCAC TCGCCAGCGC CTACACCATT
GCGGATGCTC TGGATCGTAT CAATGTGCCT AACATCATCA CCGGCTTTAC AACGTTTGGT
AGCCCAGATT ATGAAACCAT GTCGAAGCGC GGGTTTACAC GTTTCGAGGC GCTCATGCTG
CCCATTATCA AAAACTGGAA TGAGAAAGCT AACTCACCAG AGATCCGCGC CCGCATGGGC
TGCGTATGTG AGACGTTCCC CCTGCTCAAT AACGTCGATG GTGAGAGCGT CGCGCAGCTG
GCCACTCTGT TTGCAGGGCG AATGGAGGAC AAAAAAATCA TGCTGGTTAT GAGCGACGGG
GCACCATGTG CTGCAGGCGA TGGGTTCCAT GAGCATTTGC GAACCGTCAC CAAAGAAATT
GAGACGTTAA GTGACATCGA TTTGATGGCT ATCGGTGTTC TGACTGACGC ACCACGACGC
TACTACAAAA ATTACGCACT GGTTAACAGC GTAGAAGAGT TAGGGCCGTC AGTCGTCACT
GAGCTATCTC GTATCATTCT TGGGTAA
 
Protein sequence
MSKAMTRAVL KEVQDFRDCV KRVVAMLSGK QIPVAERGNE AYVRYNRRGE PVLVNIPSIP 
DDASPTLMNA VRGFLDHEVA HILFTDPKVA MKMRERGKAP STGLWNALED VFIERRMGQV
FNGTRRNLLA TQNLVIDKYF KGKVSEAVSI CHGNQRELFL KFFLCPVVRA WDGQSPFIDF
MEEHWHLIDK PVALLKEHGI DVAVRNMSNT EDCVKVAAAI AQIMQDMKDK PEGKLPELKS
SAKKPSKSKD ESEETPESGD DPSHSESAPK RTKGEDDDKE EQEDDASEEE DSGDSDLPDS
LDKDLPIHDK EISDTESKYT EAGEDESGDT PESDDAGMES GDSDDEGGSD GTGAPTPGDG
IREDADDSDG YGSGAAGDGD SDNGEDSDAG REESEGEDEG EEDVADHTDG EGKENEDAAE
APEDSESGFV PAPDEMTLED ALKALDEMEE GTDEMTEDAL SATISKELMS ASLSEYRPYD
RSYDFIGLID EAEEHVKRTR KTFGAIPMHS PVDRYRMVPE GRKLFELKIE KHLSAGVSST
LAKDLERAIA SRNRVQFIPG QRRGRIHGAN LYRLAMNDDR VFRKKEDHRA VNACVQQVID
LSGSMGGRKI QLALASAYTI ADALDRINVP NIITGFTTFG SPDYETMSKR GFTRFEALML
PIIKNWNEKA NSPEIRARMG CVCETFPLLN NVDGESVAQL ATLFAGRMED KKIMLVMSDG
APCAAGDGFH EHLRTVTKEI ETLSDIDLMA IGVLTDAPRR YYKNYALVNS VEELGPSVVT
ELSRIILG