| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0097 |
|---|
| Symbol | |
|---|
| ID | 5798243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010157 |
|---|
| Strand | - |
|---|
| Start bp | 66988 |
|---|
| End bp | 67890 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641337905 |
|---|
| Product | integrase core subunit |
|---|
| Protein accession | YP_001604524 |
|---|
| Protein GI | 162417736 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 0.368489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGTT ACTACATCCA GCCCAAACGT AAAATGCGGC CATCAAAAAG AACGGTTCGC
GTCGAAACCC AGCCGGGATA TCAGCTCCAG CACGACTGGG GCGAAGTCGA GCTAGAGGTT
GCTGGGCAAC GGTGTAAAGT TAACTTCGCG GTTAATACGC TGGGGTTCTC CCGACGCTTC
CATGTCTTCG CTGCGCCAAA GCAGGATGCT GAACACACCT ATGAGTCGCT GGTCCGTGCC
TTCCGTTACT TCGGCGGCAG TGTGAAAACC GTGCTGGTTG ATAACCAGAA AGCCGCGGTG
CTGAAAAATA ACAACGGAAA AGTGGTGTTC AACTCCGGGT TCCTCTTGTT GGCCGAACAT
TATGACTTCC TGCCACGGGC CTGCCGCCCG CGCAGGGCCA GAACCAAAGG TAAGGTGGAG
CGGATGGTGA AATATCTTAA GGATAACGTC TTCGTCCGGT ACCGCAGGTT CGACAGCTTC
ACCCATGTTA ACCAACAGCT GGAGCAGTGG ATGGCGGATG TTGCTGATAA ACGCGAGCTT
CGCCAGTTCA GACAAACACC GGAACAGCGC TTCGCGCTGG AACAGGAGCA TCTGCAGCCG
TTGCCGGATA CGGACTTCGA TACCAGCTAC TTCGACATCC GCCATGTGTC CTGGGACAGC
TATATCGAGG TTGGCGGCAA TCGTTACAGT GTTCCCGAGG CTCTGTGCGG GCAACCAGTC
TCGATACGTA TATCGCTGGA TGACGAGCTG CGGAGCTACA GTAATGAGCA GCAGGTGGCC
TCACATCGAC TCTGTTCAGC ATCGTCTGGC TGGCAGACTG TGCCGGAGCA CCACGCCCCG
CTCTGGCAAC AGGTCAGCAT GGTAGAACAT CGCCCACTGA GTGCTTATGA GGAGTTGCTG
TGA
|
|---|
| Protein sequence | MLRYYIQPKR KMRPSKRTVR VETQPGYQLQ HDWGEVELEV AGQRCKVNFA VNTLGFSRRF
HVFAAPKQDA EHTYESLVRA FRYFGGSVKT VLVDNQKAAV LKNNNGKVVF NSGFLLLAEH
YDFLPRACRP RRARTKGKVE RMVKYLKDNV FVRYRRFDSF THVNQQLEQW MADVADKREL
RQFRQTPEQR FALEQEHLQP LPDTDFDTSY FDIRHVSWDS YIEVGGNRYS VPEALCGQPV
SIRISLDDEL RSYSNEQQVA SHRLCSASSG WQTVPEHHAP LWQQVSMVEH RPLSAYEELL
|
|---|
| |