| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1775 |
|---|
| Symbol | |
|---|
| ID | 5774563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1623530 |
|---|
| End bp | 1624477 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 641317430 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_001583109 |
|---|
| Protein GI | 161529283 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1041] Predicted DNA modification methylase |
|---|
| TIGRFAM ID | [TIGR01177] conserved hypothetical protein TIGR01177 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAA GTTTTTTTGT ATTATCTAAA GAATATTTAG AGATTGCAAT TGATGAGGTT
ATTACAATAG CAAAAACTTT TGATAGATTT TCTAAAATTA AAATTATTTC AAACTTAGTA
ATTATTCAAT CAAAAACTAA TTGGTATGAA ATTTCAAAGA AAGCAACATT TGTAAAAACA
TCAGGACAAA TATTACGAAA AATGTCTGGA TTGTTTTTAG ATGAAGGAAA TTTTGAAATA
TTAAAAAATG CAAAAACATT CGTTTGTAGA ATTATCAATT TATCTTCAAA TCAGTTCGAT
ATACCAGAAT TGGAAAATTC CATGGGTGAT ATGATTTCAA AATTCTCTAA TGCAAAAGTA
AAACTTGAAA ATCCAGACAT TACAGTTTAT TTGATTTTTA CAAATAAAGA AAATTTTTTT
GGGTTTTCCA AGATTACAAA GGAGAAAAAG AGACCAAAAA AGGCAATATC ACAGCCACAT
GAATTAGATT GGAAATTAAC AAGGGCAATG ATCAATCTAG TTGGATTAAA AAAAGGAGAA
ACAGTATGTG ATCCATTCTG TGGAACTGGT ACAACGCTTC TAGAAGCTGA GTCAATGGGA
ATTCACGGAA TTGGTCTAGA TTTTGATGAA AAAATGGTTG AAATCACAAA AAAGAATCTC
AAAGAAAATG GATACAAATC AAGAGTAATT CATTCAGATT TCCAAGAAAT TAAGAACATG
GCTGATGAAT TTGACGGTAT TGTAACAGAT TTCCCATATG GAAAAAATAC AAAAACATCA
GAAAAACCTG AAGAGATCAT TAAGAAATTT GTGACTATTG TACCAAAAAG AAAGAAGATG
GCTATAATGT ACAAAAAGGA ATTGGGAGAC AAATTGAAAT TAAAAGGATT AAAAAAATAT
CAAATCTATA GGCATAAAAG CTTGACAAGG ACAATTCTGA TAAAATGA
|
|---|
| Protein sequence | MPESFFVLSK EYLEIAIDEV ITIAKTFDRF SKIKIISNLV IIQSKTNWYE ISKKATFVKT
SGQILRKMSG LFLDEGNFEI LKNAKTFVCR IINLSSNQFD IPELENSMGD MISKFSNAKV
KLENPDITVY LIFTNKENFF GFSKITKEKK RPKKAISQPH ELDWKLTRAM INLVGLKKGE
TVCDPFCGTG TTLLEAESMG IHGIGLDFDE KMVEITKKNL KENGYKSRVI HSDFQEIKNM
ADEFDGIVTD FPYGKNTKTS EKPEEIIKKF VTIVPKRKKM AIMYKKELGD KLKLKGLKKY
QIYRHKSLTR TILIK
|
|---|
| |