| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1773 |
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| Symbol | |
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| ID | 5773144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1620969 |
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| End bp | 1622612 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641317428 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001583107 |
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| Protein GI | 161529281 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTAG GAATTATTGG GATTGTTATA GGATATAGAA AATTTTCATC TTGGATAGGT
TCTAAAAAGA TCTATTATCA AAGACCACAT TTTTCTAGAT TTTTAAGAAG AGCTGTTCTG
CCAGTTTTTG CAATTGCGTT AATTACAGCT ATTAATATTC ATGTACAAAC TGGTGTACTG
TTAGGAGAAG ATTTTTCACT TGGGGTTGAT GAAGGAGTTT CTCCACAAGA AATTTTTGCA
AAAATTCTCA ATACATTCAA TATTTTGGTA ATAGGCTATA CAATTTCACA TCTTGTTCCT
ATAGCTCTTA CAAAATATGA CAAATCTGGT TTAGAGAAAG AAGATTTTGA TGCATGGTTT
GAGATGAGAG GATTTATCGA TGATAAAGAT GGCTTGTTTC ATAAACTCTA CAAATGGCTT
CCACCAAAAA TGACTCCCGA AGACTTGACA GATGAAGAAT TCAATGAAAT GCTAAAATCA
AAAGAAGGAA TGAAAAAACT AGAAGAGTTT AGGACTGCGA AAGGAAATCC TATTGGTGGA
TATGAAAAGT TAGTTGACAA TCCATTTGAA GAATGGAAAA AATCAGAGAG AGGTAAATAT
CAGAAATATT ACCAAAATTG TGTCACTGGA AATAATCAAT CTGGAAGAAA ATTAAGACCG
GGAGCAAAAC CGGATGAGAT ATTTCCTATT GATATTTGGA GAGAAGAAAA AAGAACACAC
GGATATGAAC CAATTATTCC AAGTAATCGT CCTCCAGGAT ATGCAAAGAA GAAAAGAGAA
GGAATTCCAA GATCAGCAAA ACAAATTCTG CCAATTGGAA TTTTTATTGC AACAATTTTA
GGAGTTGTTG CTTGGTGGGG TGTTGATTTA ATTGTATTAG CTACTGCAAC AGGTGGATTA
GCAATTGGTT TAGGTTTAGC ATTGCAAGAG ACAATGCAGA ACTATTTTGC TTATATTTTG
ATTAGAAAAG ACAAGATTTT CGTTGAGGGT GAACGAGTAC AACTAGATAC AGGGTATAAT
GGGTATGTAC ACAAAATCAC ACCTAGAGTT ACATATGTTA GAGATGCATT AAACGAATCA
ATCGCCATAA TTCCTACAAG ACAGTTAGTC AATGCACAGA TTGTAAATTA TACACAAGGA
GTAAAGATGG TACCTGCAAT TGTTGATGTA GGTGTTTCAT ATCTAAATGA CCCAAAACAA
GTTTCAGCAA TTCTTGTTAA AGTAGGAAAA CGTGCAATGA AAGAAGTTGT TGATGCTAAA
GGAAGACACC TAATAAGACA ACGAAGATGC CCTTATCTAG ACATCAATAA ACCAAGTTGT
GGTTGTGACA AGGATATCCA TATAGACATT AATCAACCAG TGATTAGATT TAATCAGTTT
AATGATTCAT CATTAGATTT CTCATTATGG GTATATGTTC GAGATTATGG AGCTCAATTC
AAAACAAAAA CAGACATGAG AATTATCATG TATGAAGAAT TTAAGAGATA CGACATTAGA
ATTCCATGGC CAATTAGAAC AGTTTACCAA GGAGATGAAA AACGCGAACA AGAAGAGATT
GACAGACTCA AGGAACAAAG AAAGAAGGTT ATTGATGAAT ATGGTACAGG CGACATTGGT
CGTGGAAGTG GAGAAGACGA ATAG
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| Protein sequence | MILGIIGIVI GYRKFSSWIG SKKIYYQRPH FSRFLRRAVL PVFAIALITA INIHVQTGVL
LGEDFSLGVD EGVSPQEIFA KILNTFNILV IGYTISHLVP IALTKYDKSG LEKEDFDAWF
EMRGFIDDKD GLFHKLYKWL PPKMTPEDLT DEEFNEMLKS KEGMKKLEEF RTAKGNPIGG
YEKLVDNPFE EWKKSERGKY QKYYQNCVTG NNQSGRKLRP GAKPDEIFPI DIWREEKRTH
GYEPIIPSNR PPGYAKKKRE GIPRSAKQIL PIGIFIATIL GVVAWWGVDL IVLATATGGL
AIGLGLALQE TMQNYFAYIL IRKDKIFVEG ERVQLDTGYN GYVHKITPRV TYVRDALNES
IAIIPTRQLV NAQIVNYTQG VKMVPAIVDV GVSYLNDPKQ VSAILVKVGK RAMKEVVDAK
GRHLIRQRRC PYLDINKPSC GCDKDIHIDI NQPVIRFNQF NDSSLDFSLW VYVRDYGAQF
KTKTDMRIIM YEEFKRYDIR IPWPIRTVYQ GDEKREQEEI DRLKEQRKKV IDEYGTGDIG
RGSGEDE
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