Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1761 |
Symbol | |
ID | 5773738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1608962 |
End bp | 1609603 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641317416 |
Product | cyclase family protein |
Protein accession | YP_001583095 |
Protein GI | 161529269 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACCAA TCGATCTCAC ACTTACAATA TCAAAATCTA TCCCAAGTTT TCCTGGTTCT CCAACACCAC AATTCATTTC ATGGTCCCAT CTCAAAGAAG ATGGATATAA TCTTGAATTA TTGTTCCTAA GTTCGCATAC TGGAACTCAT CTTGATGCTC CTTTTCATTT TGTTAAAAAT GGGATCAAAA TTGACCAGAT CCCACTTGGT AGATTAATGG GGAAAGCAAT TCTAATTAAA ATAAAGAAAT CAAAAAACTC TCCAATCACA AAATCAGACA TTGTTCACTT TGAGAAAGAA AATGGTAACA TTCCTGATAA ATCATCTATC TTCTTTTTTA CAGGTTGGCA AAAAAATGTC AAAAAAGATA ATTATTTTAC AGAAAATCCT GGACTAGCAT TATCGGCAGC TACATATCTT GCACAAAAAA ATACTAATCT TGTTGGAATA GATTCACCTA GTATAGATCT TGGAAAAGAT GAATCATTTA GTGTTCATCA CATTTTATCA AAAAAAAATA TTTTGATAGT AGAAAATTTG GCAAATTTGA ATAAGATCAA ATCAAGAGAA TTTGATTTTA CAATTCTACC CCTAAAACTA AAAGATGCAA CAGGTTCACC AGTAAGAGCC GTAGCACACT AA
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Protein sequence | MKPIDLTLTI SKSIPSFPGS PTPQFISWSH LKEDGYNLEL LFLSSHTGTH LDAPFHFVKN GIKIDQIPLG RLMGKAILIK IKKSKNSPIT KSDIVHFEKE NGNIPDKSSI FFFTGWQKNV KKDNYFTENP GLALSAATYL AQKNTNLVGI DSPSIDLGKD ESFSVHHILS KKNILIVENL ANLNKIKSRE FDFTILPLKL KDATGSPVRA VAH
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