Gene Nmar_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1756 
Symbol 
ID5774349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1606902 
End bp1607219 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content36% 
IMG OID641317411 
Producttranscription termination factor Tfs 
Protein accessionYP_001583090 
Protein GI161529264 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID[TIGR01384] transcription factor S, archaeal 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGTTTT GCCCCAAATG TGAGGTCAAA TTAAAAAAAG GTACTTCTGG CCTTGAATGC 
TCAAAATGTG GTTATACAGA AGGTGCAGAA GAAAAACAGA CCAAAAAAAC TGTTGAAACT
GAAGAACAAG AAGAATCCAT TTTAGCTTTT GAAGGAAATG AGGGAGAAGA ATCTCATCCA
ACTATCAAAA TAGAATGTGA GAAATGTGGA CACGATGAAG CAATTTGGTG GATGCTTCAA
ACAAGAAGTG CAGATGAACC AACAACACAG TTCTATCGAT GTACAAAATG TCAATATACT
TGGCGTAATT ACGCATAA
 
Protein sequence
MKFCPKCEVK LKKGTSGLEC SKCGYTEGAE EKQTKKTVET EEQEESILAF EGNEGEESHP 
TIKIECEKCG HDEAIWWMLQ TRSADEPTTQ FYRCTKCQYT WRNYA