Gene Nmar_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1705 
Symbol 
ID5773434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp1563854 
End bp1564537 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content34% 
IMG OID641317359 
Producturidylate kinase, putative 
Protein accessionYP_001583039 
Protein GI161529213 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0528] Uridylate kinase 
TIGRFAM ID[TIGR02076] uridylate kinase, putative 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.118956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAA GAATTGTAAT CAAACTATCT GGTAGAGTTT TTGCCATGGA TAATGTCAAA 
CTTCTCAAAG ATTGGGCAGA ATTTCTAGTA AAAATCAGTA AGGTATGCCA GCCAATAATT 
ATTGCTGGAG GTGGAAACAT TGCTAGACAT TACATTAATC ATGCAAGATC TTCAGGAGCT 
GATGAATCCA CCCTTGATGA ATTAGGAATT GAAATTTCTA GATTAAATGC AAAACTGTTG 
ATTTATGCTC TAAAAAACAA AGCATATTCT CATCCCCCAA CTACACTACA AGAAGTAAGA 
CATGCAGTAG ATGACGGATT GATTGTTGTT GCTGGAGGAC TTCATCCTGG TCAAAGCACT 
AATGGTACTG CTGCATTGAT TGCAGAGAAA GTAAAAGCTG AACAGTTTCT TAATGCTACT 
GATGTTGATG GAGTTTACGA TATGGATCCT AACAAATTCA AAAAAGCAAA AAAATTCAAA 
CGAATTGAAT TGAAAAATCT CAAAAACATG TTAGTTCATG AGGATTCTGT AGCAGGAGGA 
TATGATCTCA TGGATATAGT TGCACTCAAA ATTATTGAGC GCTCAAAAAT TAAAACAAGA 
ATTCTCAAAG CAAGTCCAAA AATTATTGAA AAAGCCATTA AAGGCGGTAA TTTGGGAACT 
GAAATAATTA TTCCAACAAA ATAG
 
Protein sequence
MKKRIVIKLS GRVFAMDNVK LLKDWAEFLV KISKVCQPII IAGGGNIARH YINHARSSGA 
DESTLDELGI EISRLNAKLL IYALKNKAYS HPPTTLQEVR HAVDDGLIVV AGGLHPGQST 
NGTAALIAEK VKAEQFLNAT DVDGVYDMDP NKFKKAKKFK RIELKNLKNM LVHEDSVAGG 
YDLMDIVALK IIERSKIKTR ILKASPKIIE KAIKGGNLGT EIIIPTK