| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1666 |
|---|
| Symbol | |
|---|
| ID | 5773774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1523754 |
|---|
| End bp | 1524788 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641317320 |
|---|
| Product | kelch repeat-containing protein |
|---|
| Protein accession | YP_001583000 |
|---|
| Protein GI | 161529174 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3055] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG CAATATTTTT TTTAATTCTT TTGTCTTTTA CAACTCCAAA TATTTTTGCT
GAAGAACCTT TAGAAGGTTG GGAACGACTA TCTAATCTAC CTGAACCAAG ATCAGAATCA
AAAGCAATTG CATATGAGGA TAAAATCTAT GTGATTGGGG GCCTGAACAA CAAAGAACTT
GCTGAAAATT CTGTGTTTGT TTATGACACT AACGAAGATG TTTGGAGCAT TAGTACTTCT
ATGCCAAGTA TGTTACATCA TTCTGGTGCG TCAATTTATG AAGGAAAATT GTATGTAGTT
GGAGGATATT ATGATAAATG GATTCCATCT GATGAATTAT TAATTTACGA TATAGATGCT
GATGTGTGGT CAAAGGGCAC AAACATGCCT ACAGCTAGAG GGGCATTAAC TGCAGAATTT
CTTGACGGAA AATTATATGC GGTTGGAGGA TTTAATACAG AAACTCGTTT TGAAAACGAA
GTTTATGATC CAGTAACTGA CTCTTGGGAG AAAAAATCTG ACTTACCAAC TCCTAGAGAA
CATCTTGCAT CTGCAGTTTT AGATAGTCAA ATGTATGTGA TTGGAGGAAG ATCTGGACAA
CTCAATGTTG ATGCAACAGA AGTGTATGAT TTTACAGCTG ACTCTTGGGA ATCTCTTGAA
CCTATTCCTA CTGCAAGAAG TGGGTTAGCA GCATCTGCCA TGAACGAAGC AATATTTGTT
TTTGGTGGTG AGGGATATAC TAACACCTTT GGCGAAAATG AGGCATATAT ACCAGAGAAA
GGATGGTTTG AACAACAACC AATGCCAATT CCAAGACATG GATTAGATGC AGTTACTGTT
GACGGAAATA TCTATTTGAT TGGAGGTGGA ATTGCACCAG GTGCTAGTTA TAGTCCAATA
GTTGAAAAAT ATCATAACAC AGTAATTCCA GAATTTGGAT TCTTTGTTGT ATTGGTTTTT
ACACTTTCCA TTGGTTTGAC AATATTGTTT ACAAAGTCTA AATTCTCGTT ATTTACAAAT
GTCTCTAAAA ACTAG
|
|---|
| Protein sequence | MKIAIFFLIL LSFTTPNIFA EEPLEGWERL SNLPEPRSES KAIAYEDKIY VIGGLNNKEL
AENSVFVYDT NEDVWSISTS MPSMLHHSGA SIYEGKLYVV GGYYDKWIPS DELLIYDIDA
DVWSKGTNMP TARGALTAEF LDGKLYAVGG FNTETRFENE VYDPVTDSWE KKSDLPTPRE
HLASAVLDSQ MYVIGGRSGQ LNVDATEVYD FTADSWESLE PIPTARSGLA ASAMNEAIFV
FGGEGYTNTF GENEAYIPEK GWFEQQPMPI PRHGLDAVTV DGNIYLIGGG IAPGASYSPI
VEKYHNTVIP EFGFFVVLVF TLSIGLTILF TKSKFSLFTN VSKN
|
|---|
| |