Gene Nmar_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1661 
Symbol 
ID5774176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1519440 
End bp1519832 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content33% 
IMG OID641317315 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001582995 
Protein GI161529169 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATT TTCTCGTAGA CGGATGCAAA TGCTGTCCTA TCGACAACAC TTTTCAGATT 
ATTGGTAAGA AATTTACTCT TCACATATTA CGCAATATGA TAATCTTGAA CCAACATCAT
TTCAATGAAT TTTTAGATTC TATTGAAGGA ATTAACCCAA ATACTTTATC CACAAGACTC
AAGGAGATGG AAAAAACTGG TCTGATTGAA AAAAATATCT ACAACGAAAC TCCTGTTAGA
ATAGAATATA CTCTTACCAA GAAAGGAAAA GCATTACAGC CAATTTTAGA AGAAATGGCA
AAATTTTCAA CAAAGTTTTG TTGTGATGAT GTGTTTTGTG ATGCAAAACC CCGTACATTT
AGACAGGTAT ACGGAAGCAC CTTCCAATTA TAG
 
Protein sequence
MIDFLVDGCK CCPIDNTFQI IGKKFTLHIL RNMIILNQHH FNEFLDSIEG INPNTLSTRL 
KEMEKTGLIE KNIYNETPVR IEYTLTKKGK ALQPILEEMA KFSTKFCCDD VFCDAKPRTF
RQVYGSTFQL