| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1652 |
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| Symbol | |
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| ID | 5773128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1510361 |
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| End bp | 1513144 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641317306 |
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| Product | copper resistance D domain-containing protein |
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| Protein accession | YP_001582986 |
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| Protein GI | 161529160 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only
[V] Defense mechanisms |
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| COG ID | [COG1276] Putative copper export protein
[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC
[COG4257] Streptogramin lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGT TTCTGATTGT TTTATTGATG ATGTCGTTTA TTTCAATTCC ATTAGCATCA
GCTCATCCTT TTACTGAGGA AACTATTCCA AGTTTAACAT CTAGTGCTCC AGCTGGAACA
ACAGAAGTTA TCGTATATTT TTCAGAACCA ATTGATATTA ACTTTAGTGA ACTCAGAGTA
TTTGATACAA ATGGAAATCA AATAGACAAC AAAGATACGG CTTACTATGA AGGAGAATTA
TCTCTGATCA TTACAACATC ACCATTGGAA GATGGAGTTT ATACTGTATC AACCAAAGTT
CTCTCCAAAG TAGATGGACA TCTTGTTCCA GATGCATTCT TGTTTGCAGT TGGTGATGTT
GTAATTGATC CCTCATTACT TGATGTAGAA CGACCATCTG AAATCATATT TTTACCCGAA
GCTGGTGCTA GATTCCCAGG ACTGATTGGT CAAACAATTG TCTTAGGTGC AGTAATTGCA
TCACTCATAA TTTGGGGAAC ACAGAATAAA CAACTAATCA GAGAAGAATT AGATAAGATT
GGAAACTTCC ATCAGGGAAA GTTTATGTCA ATTACAGGAA TTGGGCTTGT TTTAATTTTC
ATTTCTAATA TTTTGATGAT TGCAGTTCAG AGTATAAGAC TTGGGGTTTC TCCGCTTGAT
GCAATTCAAA CGGATTTTGG AATAACATGG ATATTGAGAA TGAGCATTAC AATAATTATA
CTAGGTATTT GGTTTAGACT TGATAGAAGC AAGTCACTAT CAAAAAAGAA TCAAATTCTA
TTGTTGGGAG CAATGCTTGC ATTAATTTCA ACTTCAAGTT TGATTGGTCA CGGTGCAGCT
AGTGAAAACA TACCAGCATT AATACTTGAT TACATTCACA ATTTAGTTTC AGGAGTTTGG
ATAGGCGGAA TTATTTACTT CGTATTTATT TTACTTCCAA CATTCTCTCA ACTAAAAGAG
ACACAACGAG AAAAGATGAG TCTGTTAATG ATTCCTCGAT TCTCAATTAC ATTTATCATT
GCTGTAGGAG TGATCATAAT CACAGGTCCA ACATTGATGT GGTTTCTAGA AAGTGATATT
AGATTAATTA CAGAATCGAT TTATGGTCAA TTAATTATTC TAAAGATTTC AATTGCAGCA
GTAATAATTG CATTTGGGGG ATTTTTTCAA TTCAAATTAC AAAAGAAGGC AGAAAAGAAT
CTGGAATCAG GAAAAATTTC TGTTCATAAA AAATTAAAAA AATCGCTCAA AGTTGACGTA
GTACTAGGAA TAGTACTTCT AGGAGTTGTT GCATTAATTA CAAATGCAAC ACTACCAGCA
GGAGAAATCC AAAAAATTGA TGCACAAGAG ATAATTTACG GATTTGAAAC TCTGGAATTT
ACTGAAAATG CAAAATTTGA CATTGACATT TCGCCATTTT CAAGTGGCTC AAACACAATT
CTAGTTAAAG TTAGTGACTT TGAGGGAAAT CCACTCTACG ATTCAAATCA GCTTAAAGTC
AAGGTATCAA ACCCATCAAA GAATATCTCA CCAATAGAAG TACCAATGGA GATAATCAAA
CAGGATAAAA ATAGACCAAT AGAATTCAAA GGTGAAATGA CATTTGGGTT TTCAGGAGAA
TGGTTAATGG AAGTTGAGGC ACAAAGAACT GAAAATGCAA ATGAATCAAA GCTTTTGAAT
TTACTAGTAA AACCAAGACT GACTGACATT CAGACACAAG TTATCGAATA CGAACTCCCA
AAAGATTCAA AACCACTTTT CCCATTGTAT GATGGACGAG ATACACTTTG GGTAAGTGAT
GCATCAGCTC CACGTTTGTG GGAATTTTCA CTTGAAACTC AAGAGTTTAC ATCATATTCA
TTTGATGGAT TGACTACAAC ATTTCTAACA CAAGACAAAG ACGGTAAAAT TTGGTTTACA
GATACTCCCA GAAATCAAAT TGGATTCATA GACCCTCAAA CAAAAGAGAT TATAACAAAA
ACAATTCCAA AACTTGATCC TGTTATTTCA GACAATACTC CACTTTTCAT AAAAGCAGAC
TTTGATGGAA ATATTTGGAT TACAATTGTT AACAAAGACA GAATTGTAAA ATATATACCA
GAAAATGATG AGTTTGAAGA GATTGTTCTT CCAGGAAAAG AGAACTTGCC ATTTGCATTA
GATATTGATG TAGATGGAAA GATGTGGTAT ACAACAACTG GTGCAGGAAA TATTGGATAT
ATTGATCCTA AAGACAATCA AATTACTCAA TTTTCAAATG ATCCACCATT ACAAGGACCT
GAGGCTTTGC TCTTTGATGA AGATGGAAAC ATCTGGATTG CAGAGCATAC AGGCTTGGCA
ATTACCAAGT TTAACCCAGT TTTAGAGACA TTTGAGAGAA TTACCGTGCC TAATGATGAA
GCATTACCGT TTGGTATGAC ATTTGATAGA TATGGAAATG TTTGGTTTGC TCAACATACA
ATAGATAGTA TTGGAGCATA TGATCCGGAT AACAATAATT TGATTGAAGT ACCAGTTCCT
TCAGAAACAT CCTTTGTACA ATTCATGACA TCAGATGGAG ACAGTAATGT TTGGTTTGTT
GAACAACAAA CAAGTAAGAT TGGTACAATA AAGATGACAG AAATTCCAGT TACTGCATCA
CAAATTCAAT CATCAGGAGA ATTTGAATTA AAATACACAG AACTTGCATC GCCACTAATT
GCATTAGGAA TTATTGCAAC ATCTTTGTTT TATGTGAAGA GTATTCAAGA TAAAAGAAGA
CTAAATGAAT TAATTAATTC TTAG
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| Protein sequence | MQKFLIVLLM MSFISIPLAS AHPFTEETIP SLTSSAPAGT TEVIVYFSEP IDINFSELRV
FDTNGNQIDN KDTAYYEGEL SLIITTSPLE DGVYTVSTKV LSKVDGHLVP DAFLFAVGDV
VIDPSLLDVE RPSEIIFLPE AGARFPGLIG QTIVLGAVIA SLIIWGTQNK QLIREELDKI
GNFHQGKFMS ITGIGLVLIF ISNILMIAVQ SIRLGVSPLD AIQTDFGITW ILRMSITIII
LGIWFRLDRS KSLSKKNQIL LLGAMLALIS TSSLIGHGAA SENIPALILD YIHNLVSGVW
IGGIIYFVFI LLPTFSQLKE TQREKMSLLM IPRFSITFII AVGVIIITGP TLMWFLESDI
RLITESIYGQ LIILKISIAA VIIAFGGFFQ FKLQKKAEKN LESGKISVHK KLKKSLKVDV
VLGIVLLGVV ALITNATLPA GEIQKIDAQE IIYGFETLEF TENAKFDIDI SPFSSGSNTI
LVKVSDFEGN PLYDSNQLKV KVSNPSKNIS PIEVPMEIIK QDKNRPIEFK GEMTFGFSGE
WLMEVEAQRT ENANESKLLN LLVKPRLTDI QTQVIEYELP KDSKPLFPLY DGRDTLWVSD
ASAPRLWEFS LETQEFTSYS FDGLTTTFLT QDKDGKIWFT DTPRNQIGFI DPQTKEIITK
TIPKLDPVIS DNTPLFIKAD FDGNIWITIV NKDRIVKYIP ENDEFEEIVL PGKENLPFAL
DIDVDGKMWY TTTGAGNIGY IDPKDNQITQ FSNDPPLQGP EALLFDEDGN IWIAEHTGLA
ITKFNPVLET FERITVPNDE ALPFGMTFDR YGNVWFAQHT IDSIGAYDPD NNNLIEVPVP
SETSFVQFMT SDGDSNVWFV EQQTSKIGTI KMTEIPVTAS QIQSSGEFEL KYTELASPLI
ALGIIATSLF YVKSIQDKRR LNELINS
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