| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1649 |
|---|
| Symbol | |
|---|
| ID | 5774456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1507916 |
|---|
| End bp | 1508743 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641317303 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582983 |
|---|
| Protein GI | 161529157 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC TGTTTGTATT ATTACTTATT CCATTTTTAA TGGTTCCAGC ATTTGCTGAA
ACTCAAACAT TACCCACAGA AAAGAATACT CTTGATGTTA AATTAACATA CGATACCATT
GAGCCAGGTA TTCAAACTAA GATCAACATA GATTTTATTA ATCCACAAAC TCAAAAAGTT
CAAGAACACA TTGACTATAC AGTAGTTGTT TCAAAAGATG GTGAGACTGT ATTTGGTCCA
ATTCCACTTA CACATACTTC TCTGGGTTCT GTCAAAATCC CAATAGAATT TAATCGTGGT
GAAGGAGTGT ATTCAATGGA CTTTGAAGTT GAAGGAATTT TATTCCAACC AATTCCAAGA
GAGACTGTAT CTTTTGATAT TCAAGTAGGT GAAGCCAATG CACAACCAAT TACACCACCT
GAAGACAACA ATGATGAGAA TAATGGAGAA AATGGGGGTT GTCTTATTGC AACAGCAACA
TTTGGTTCAG AACTTGCACC ACAAGTACAA CAACTTAGGG AACTTAGAGA CAACACAGTT
CTCAAAACAA ATTCAGGAAT TACATTTATG ACAACTTTTA ATCAATTCTA TTATTCGTTC
TCACCAGTTA TTGCAGACTT TGAAAGAGAG CAACCATTAT TCAAAGAAGT TATGAAAGTA
ACACTCACTC CAATGTTATC ATCATTATCA TTGCTTAATC ATGCAGATAT TGATTCAGAA
CAAGAGATGT TAGGTTATGG CATATCCATA GTACTGCTAA ATCTTGGAAT GTATGTTGGA
ATTCCTATAT TTGGAATTCT AAAGTTGTAC CAATTTAGAA AAAACTAG
|
|---|
| Protein sequence | MKILFVLLLI PFLMVPAFAE TQTLPTEKNT LDVKLTYDTI EPGIQTKINI DFINPQTQKV
QEHIDYTVVV SKDGETVFGP IPLTHTSLGS VKIPIEFNRG EGVYSMDFEV EGILFQPIPR
ETVSFDIQVG EANAQPITPP EDNNDENNGE NGGCLIATAT FGSELAPQVQ QLRELRDNTV
LKTNSGITFM TTFNQFYYSF SPVIADFERE QPLFKEVMKV TLTPMLSSLS LLNHADIDSE
QEMLGYGISI VLLNLGMYVG IPIFGILKLY QFRKN
|
|---|
| |