| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1645 |
|---|
| Symbol | |
|---|
| ID | 5774252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1503352 |
|---|
| End bp | 1503852 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641317299 |
|---|
| Product | ArsR family transcriptional regulator |
|---|
| Protein accession | YP_001582979 |
|---|
| Protein GI | 161529153 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3398] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA GAGATTCACA AATTCAAGAA ATAATAGAAA AAAATCCAGG AATCCAATTC
CGTGAAATCA TGCGTTCTTC TGGATTAAAA AATGGAGTAC TAAGTCATTA TCTAGATAAA
TTAGAAAGAA ACGGAGTTAT CAAAGCTGAT CGTGGTCCAA GACAAGCTAG ATTCTATCCT
CCACAAATTA CAGAAGATGA ATCAATTGTT ATCAAAGCAT TAAGAAAACA AACTCCACGT
GATTTGTTAC TTGCACTAGT CAAAGAAGAT GGTTTAGAAT TTCCTCAACT AGTTAAAGAG
GTAAACAAAT CCCCATCAAC CGTGTCATTG TATTTGTCAC AACTAGTTGA TGATGGACTA
GTAGAAACAA AAGTTGTTCA ACTCAAAAAA AGATATCATA TTAAAGTCAG AGACTTGATA
GATAAACTAG TTGAAGACTA TAGACCAAGC CTACTTGAAA AACCAACTTC TGGATTCGAA
GATATCATCA ACTCTTTCTA G
|
|---|
| Protein sequence | MTDRDSQIQE IIEKNPGIQF REIMRSSGLK NGVLSHYLDK LERNGVIKAD RGPRQARFYP
PQITEDESIV IKALRKQTPR DLLLALVKED GLEFPQLVKE VNKSPSTVSL YLSQLVDDGL
VETKVVQLKK RYHIKVRDLI DKLVEDYRPS LLEKPTSGFE DIINSF
|
|---|
| |