| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1618 |
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| Symbol | |
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| ID | 5773672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1474520 |
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| End bp | 1475245 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641317271 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001582952 |
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| Protein GI | 161529126 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTAATC TGTTAGATCC TAGCAATGTC ATAACTAGAA TGTTTAATGC AGGAAAATAT
GAAGAGATGT ATAATTATTG CAAGAGTCTC CTAGAAAAAA TCCCCAATGA TATGGTTGCA
CTTCAAAATA TCTGCTTGTC TTTAATTTAT CTTGAAAAAT ATCAAGAAGC TATATCTTAT
TGTGATAAGG TCCTTGAAAT AAAAAAATCA GATACATATG CATTGAAAAA TAAAATTTAT
GCATTAGAAA GTTTAGGTGA GTACCAACAA GTTCTAAAAT TATGTGAAGA AATTCTCTCT
TCTAACCCTA AAGATTCATG GGCGTTGAAT AGTATGGGAT TGTCATTAAA TGAATCAAAT
CAACACAAAG AGGCGCTTGA ATACTATGAA AAAGCACTTG CGATAGACCC AACAGACGTT
ACAGCTTTGA TGAACAAAGC AATATCTCAC AGCCATTTGG GAGACTATGA AGTTGCAGTT
GAATTTTATG ATAAGGCTCA AATGGTAGAT TCTAGCCTCA AAGAAATACC TCTTGCAAAA
TCGAAACTAT TTGAAAAATT AGGAGATAGC GATAATGCAT TTTTAGCAGC TCAAGGGGTT
CTAAACAAAG ATATGGAAAA AATCAAGATT GCAGCAAAAG AAAACAAATG CTCTCTTTTT
CATCAGGTTT GTGAAAATGA ATTTGAAGAA TTAGATTCAA AAAAATCTAA AATGAAAATT
AACTAA
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| Protein sequence | MVNLLDPSNV ITRMFNAGKY EEMYNYCKSL LEKIPNDMVA LQNICLSLIY LEKYQEAISY
CDKVLEIKKS DTYALKNKIY ALESLGEYQQ VLKLCEEILS SNPKDSWALN SMGLSLNESN
QHKEALEYYE KALAIDPTDV TALMNKAISH SHLGDYEVAV EFYDKAQMVD SSLKEIPLAK
SKLFEKLGDS DNAFLAAQGV LNKDMEKIKI AAKENKCSLF HQVCENEFEE LDSKKSKMKI
N
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